Pinned Repositories
any_means
The impact of different averages for ranking
arviz
Exploratory analysis of Bayesian models with Python
bottleLamp
RGB LED lighting sequences for a lamp housed in an old bottle. This lamp is powered by an arduino Pro Micro 5V.
cdhit_clstr
Reformat CDhit's `.clstr` files for easy use
codon_path
Given an amino acid sequence and a table of codon pair bias find the optimal DNA sequence encoding that polypeptide.
COVID_Critical_HCW
Code and data associated with Critical care workers have lower seroprevalence of SARS-CoV-2 IgG compared with non-patient facing staff in first wave of COVID19
do_onto
Visualise cancer types using graph embedding of Disease Ontology
Rlessons
An introduction to R, covers plots and basic stats.
scrapeAF
Aggregate HLA allele frequencies data from allelefrequencies.net at large multi population scale
SpaceMap
Generate figures using the data available through JPL's HORIZONS system
DAWells's Repositories
DAWells/do_onto
Visualise cancer types using graph embedding of Disease Ontology
DAWells/scrapeAF
Aggregate HLA allele frequencies data from allelefrequencies.net at large multi population scale
DAWells/codon_path
Given an amino acid sequence and a table of codon pair bias find the optimal DNA sequence encoding that polypeptide.
DAWells/any_means
The impact of different averages for ranking
DAWells/arviz
Exploratory analysis of Bayesian models with Python
DAWells/arviz-feedstock
A conda-smithy repository for arviz.
DAWells/bioconda-recipes
Conda recipes for the bioconda channel.
DAWells/bottleLamp
RGB LED lighting sequences for a lamp housed in an old bottle. This lamp is powered by an arduino Pro Micro 5V.
DAWells/cdhit_clstr
Reformat CDhit's `.clstr` files for easy use
DAWells/COVID_Critical_HCW
Code and data associated with Critical care workers have lower seroprevalence of SARS-CoV-2 IgG compared with non-patient facing staff in first wave of COVID19
DAWells/Rlessons
An introduction to R, covers plots and basic stats.
DAWells/SpaceMap
Generate figures using the data available through JPL's HORIZONS system
DAWells/crazydoc
Read DNA sequences from colourful Microsoft Word documents
DAWells/DAWells
Config files for my GitHub profile.
DAWells/DAWells.github.io
User github page
DAWells/interactive_plots
Templates for making plots which allow the user to interactively explore the data.
DAWells/LitMD
Literature Review in Latex. Gather summaries of relevant papers into a literature review based on user specified tags.
DAWells/MoPedS
Mongoose Pedigree Scripts
DAWells/persim
Distances and representations of persistence diagrams
DAWells/Pomologic
Download all water colours from the pomological USDA set and create an infographic
DAWells/python_package_joy
Create a simple python package called `boxed`, set up tests, and run those tests using github actions, check that the package works on multiple OSs and different python versions.
DAWells/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks