/thesis

Supplementary material for the PhD thesis "On the evolution of effector gene families in potato cyst nematodes"

Primary LanguagePythonGNU General Public License v3.0GPL-3.0

Supplementary material for the PhD thesis

"On the evolution of effector gene families in potato cyst nematodes"

by Dominik R. Laetsch


  • dna_extraction_protocol.txt

  • bamCov.py

  • extractRegionsFromCoordinates.py

  • fasta2counts.py

  • generate_popgenome_calls_SA.py

  • generate_upsetr_expression.py

  • genome_distributions.py

  • masked_fasta2bed.py

  • parse_rbbh_tables.py

  • rbbh_proteins.py

  • analysis_of_inflation_values.R

  • effector_cluster_annotation.R