/MapBySeqHmm

a hidden Markov chain model based method for denoising mapping-by-sequencing data

Primary LanguageMATLAB

Mapping Mutations by High Throughput Sequencing of Bulked Segregants

An inference procedure for sequencing-assisted genetic mapping based on hidden Markov chain model

Scripts:

  • scr_main.m -- main analysis script

  • simulator/batchSimPoolSeq.m -- a script to run the simulator

Input:

vcf files (variants)