/bioinformatics

A collection of scripts to perform various bioinformatics applications.

Primary LanguagePerl

bioinformatics

A collection of scripts to perform various bioinformatics applications.

SNPs4BurdenTests.pl

This script creates SNP and genotype input files for MONSTER to perform collapsing rare variant testing. User can specify a list of genes, desired GENCODE annotation, connected regulatory feature types, scoring and weighting method, MAF/MAC thresholds. For more information about the usage and the accepted parameters of this script see the POD documentation at the end of the file.