DanielJGS
My topics are Genetics, Network Physiomes, Data Science, Spatial Genomics, Cellular and Molecular Biology, Computational Precision Health
SF Bay Area
Pinned Repositories
Assemblytics
Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.
biofx_python
Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
Bioinformatics-with-Python-Cookbook-third-edition
Bioinformatics with Python Cookbook, Third Edition
book
CACTUS
CACTUS: A Computational Framework for Generating Realistic White Matter Microstructure Substrates
dgs
Professional Page (most updated)
gomezd.dev
Academic personal webpage, https://dgomez.dev
gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
gtex-v8
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
DanielJGS's Repositories
DanielJGS/gomezd.dev
Academic personal webpage, https://dgomez.dev
DanielJGS/biofx_python
Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
DanielJGS/book
DanielJGS/dgs
Professional Page (most updated)
DanielJGS/vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
DanielJGS/Bioinformatics-with-Python-Cookbook-third-edition
Bioinformatics with Python Cookbook, Third Edition
DanielJGS/CACTUS
CACTUS: A Computational Framework for Generating Realistic White Matter Microstructure Substrates
DanielJGS/gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
DanielJGS/gtex-v8
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
DanielJGS/academic-kickstart
DanielJGS/astro
Build faster websites with Astro's next-gen island architecture 🏝✨
DanielJGS/astro-quickstart
DanielJGS/bioinformatics
Pyt notes on generating DNA test data, determining the GC-Content, Reverse complement, Hamming distance, Finding motifs, Rabbits, Calculating minimum skew, Hidden Markov Models
DanielJGS/citationProtocol
Bioinformatics, and the ways of forming a citation.
DanielJGS/danieljgs.github.io
Dan's personal webcyte
DanielJGS/djg-s
DanielJGS/eman2
A scientific image processing software suite with a focus on CryoEM and CryoET
DanielJGS/galaxy
Data intensive science for everyone.
DanielJGS/golearn
Machine Learning for Go
DanielJGS/gomezd
DanielJGS/goml
On-line Machine Learning in Go (and so much more)
DanielJGS/GS-Lab
DanielJGS/melanoma-prediction
DanielJGS/mph1-web
MPH1 Website
DanielJGS/NS5B
This is my MD simulation data on NS5B (HPgV-1)
DanielJGS/rsHRF
Resting state HRF estimation from BOLD-fMRI signal
DanielJGS/SARS-CoV-2
Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures
DanielJGS/starter-hugo-academic
DanielJGS/surgeon-assist-net
Towards context-aware head-mounted display-based augmented reality for surgical guidance.
DanielJGS/ToDo-List
Functional Todo List