DanielNaro
Researcher at Universitat Politècnica de Catalunya. My PhD was in cryptography for genomic data. Now working on security for IoMT, and provenance information.
Universitat Politècnica de CatalunyaBarcelona
Pinned Repositories
beacon2-ri-api
Beacon v2 Reference Implementation (API)
beacon2-ri-tools
Beacon v2 Reference Implementation (Data ingestion tools)
beaconLoaderWithCLI
ChainDoctor
Python tool to modify LiftOver chain files, and check them against Fasta Dict and BAM headers.
comfyui-on-eks
ComfyUI on AWS
contrastive-unpaired-translation
Contrastive unpaired image-to-image translation, faster and lighter training than cyclegan (ECCV 2020, in PyTorch)
cost-effective-aws-deployment-of-comfyui
Cost effective solution to deploy ComfyUI on AWS with simple deployment process using ECS and CDK.
Docker_NMD_example
FingerprintingGenome
gabac
Genomics-oriented Context-Adaptive Binary Arithmetic Coding
DanielNaro's Repositories
DanielNaro/beacon2-ri-api
Beacon v2 Reference Implementation (API)
DanielNaro/beacon2-ri-tools
Beacon v2 Reference Implementation (Data ingestion tools)
DanielNaro/beaconLoaderWithCLI
DanielNaro/ChainDoctor
Python tool to modify LiftOver chain files, and check them against Fasta Dict and BAM headers.
DanielNaro/comfyui-on-eks
ComfyUI on AWS
DanielNaro/contrastive-unpaired-translation
Contrastive unpaired image-to-image translation, faster and lighter training than cyclegan (ECCV 2020, in PyTorch)
DanielNaro/cost-effective-aws-deployment-of-comfyui
Cost effective solution to deploy ComfyUI on AWS with simple deployment process using ECS and CDK.
DanielNaro/Docker_NMD_example
DanielNaro/FingerprintingGenome
DanielNaro/gabac
Genomics-oriented Context-Adaptive Binary Arithmetic Coding
DanielNaro/GangSTR
A tool for profiling long STRs from short reads
DanielNaro/GenerateSimpleBed
From a dict file, generate a BED file covering the entirety of the main sequences.
DanielNaro/GenomicRecordDispatcher
DanielNaro/gridss
GRIDSS: the Genomic Rearrangement IDentification Software Suite
DanielNaro/hmftools
Various algorithms for analysing genomics data
DanielNaro/ModifyChrNamesInVCF
Modifies the chromosome names in a VCF
DanielNaro/MuRaL
MuRaL is a deep learning framework for estimating single-nucleotide mutation rates across the genome.
DanielNaro/nmfgpu
C++ library for CUDA accelerated computation of Non-negative Matrix Factorizations (NMF)
DanielNaro/OWL_RDF_schemas
DanielNaro/panpipe
PanPipe Workflow Manager
DanielNaro/RstudioDockers
DanielNaro/SAMHeaderSequencesRenamer
Tool to rename sequence names in a SAM header
DanielNaro/t2t-variants
Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".