DeepMicroscopy - Generating Deep Insights from Deep Learning in Microscopy
This is our central home for all our digital pathology projects, focusing on deep learning.
Erlangen, Germany
Pinned Repositories
CanineCutaneousTumors
Cox_AMIL
Code for our BVM workshop submission "Attention-based Multiple Instance Learning for Survival Prediction on Lung Cancer Tissue Microarrays"
Exact
An open source online platform for collaborative image labeling of almost everything
MIDOG
MItosis DOmain Generalization Challenge 2021/2022
MIDOG_reference_docker
Reference implementation of domain-adversarial training on a RetinaNet (to use as template in the MIDOG challenge)
MIDOGpp
A large, multi-domain mitotic Figure Dataset
MITOS_WSI_CCMCT
Large-Scale Canine Cutaneous Mast Cell Tumor Dataset for Mitotic Figure Assessment on Whole Slide Images
MITOS_WSI_CMC
Large-Scale Canine Mammary Carcinoma Dataset for Mitotic Figure Assessment on Whole Slide Images
SlideRunner
SlideRunner is a tool for massive cell annotations in whole slide images
TUPAC16_AlternativeLabels
Alternative training set for the TUPAC16 auxiliary mitotic figure data set
DeepMicroscopy - Generating Deep Insights from Deep Learning in Microscopy's Repositories
DeepMicroscopy/Results-Exact-Study
DeepMicroscopy/AnonymizeSlide
Delete the label from a whole-slide image
DeepMicroscopy/MITOS_WSI_CMC
Large-Scale Canine Mammary Carcinoma Dataset for Mitotic Figure Assessment on Whole Slide Images
DeepMicroscopy/CCMCT_Bi_Multinucleated
Detection of Bi- and Multinucleated Cells in Histology Images of Canine Cutaneous Mast Cell Tumor
DeepMicroscopy/TUPAC16_AlternativeLabels
Alternative training set for the TUPAC16 auxiliary mitotic figure data set