Deepak-Balamurali

Deepak-Balamurali's Stars

• swapnasrita/Bioinformatics

  Language:Jupyter Notebook1

• MichaelClerx/making-figures

  Tips on figure making, plus help with Inkscape and Matplotlib.

  Language:Jupyter Notebook441

• WalterMuskovic/lncRNA_time_course

  This repository was created to assist with the reproducibility of all of the analyses presented in the published lncRNA time course manuscript.

  Language:R52

• datasciencemasters/go

  The Open Source Data Science Masters

  25.1k6.2k

• schneebergerlab/plotsr

  Tool to plot synteny and structural rearrangements between genomes

  Language:Python29128

• sib-swiss/training-collection

  Collection of bioinformatics training materials

  Language:Python988183

• GoekeLab/m6anet

  Detection of m6A from direct RNA-Seq data

  Language:Python11019

• theislab/spatial_scog_workshop_2022

  Tutorials for the SCOG Virtual Workshop ‘Spatial transcriptomics data analysis in Python’ - May 23-24, 2022

  Language:Jupyter Notebook5027

• microsoft/BioGPT

  Language:Python4.3k453

• jperkel/computed_manuscript

  A model executable manuscript

  Language:HTML459

• sib-swiss/single-cell-training

  SIB course on single cell transcriptomics by mostly using the Seurat pipeline

  Language:R7836

• OSCA-source/OSCA

  The package wrapping the book, for deployment via the Bioconductor build system.

  Language:Makefile8220

• pfh/langevitour

  Langevin dynamics based tours of data, in Javascript with R wrapper.

  Language:TypeScript252

• PF2-pasteur-fr/SARTools

  Statistical Analysis of RNA-Seq Tools

  Language:R10565

• LosicLab/starchip

  Detection of Circular RNA and Fusions from RNA-Seq

  Language:Perl3211

• frankRuehle/systemsbio

  Streamlined analysis package for omics-data

  Language:R4

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k995

• earlham-sherlock/earlham-sherlock.github.io

  an open source data platform, developed in the Korcsmaros Group to store, analyze and integrate bioinformatics data

  Language:Python101

• GuyTeichman/RNAlysis

  Analyze your RNA sequencing data without writing a single line of code

  Language:Python12913

• wviechtb/r-user-group

  R User Group at Maastricht University

  Language:HTML144

• aristoteleo/dynamo-release

  Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

  Language:Python43059

• johnwalley/d3-tube-map

  Draw tube maps in the style of the London Underground using d3

  Language:HTML16822

• vgteam/sequenceTubeMap

  displays multiple genomic sequences in the form of a tube map

  Language:JavaScript18627

• minoda-lab/universc

  UniverSC: a flexible cross-platform single-cell data processing pipeline

  Language:Shell447

• theislab/scarches

  Reference mapping for single-cell genomics

  Language:Jupyter Notebook34452

• cmdcolin/awesome-genome-visualization

  A list of interesting genome browser and genome visualization programs

  Language:TypeScript879112

• pachterlab/BHGP_2022

  Language:Jupyter Notebook212

• CompVis/stable-diffusion

  A latent text-to-image diffusion model

  Language:Jupyter Notebook68.9k10.2k

• PhanstielLab/plotgardener

  Language:R30328

• kanaverse/kana

  Single cell analysis in the browser

  Language:JavaScript14212