Digital Slide Archive
Tools for the management, visualization, and analysis of digital pathology data.
Atlanta, GA, USA
Pinned Repositories
ALBench
Benchmarking tool for evaluating Active Learning strategies for machine learning
CNNCellDetection
This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei in histology images
digital_slide_archive
The official deployment of the Digital Slide Archive and HistomicsTK.
digitalslidearchive.info
Documentation for installing and maintaining the Digital Slide Archive, Girder, and HistomicsTK
DSA-WSI-DeID
A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
HistomicsStream
A whole-slide image reader for TensorFlow
HistomicsTK
A Python toolkit for pathology image analysis algorithms.
HistomicsUI
A Girder plugin for pathology image annotations and analysis.
ImageDePHI
tifftools
Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.
Digital Slide Archive's Repositories
DigitalSlideArchive/HistomicsTK
A Python toolkit for pathology image analysis algorithms.
DigitalSlideArchive/digital_slide_archive
The official deployment of the Digital Slide Archive and HistomicsTK.
DigitalSlideArchive/HistomicsUI
A Girder plugin for pathology image annotations and analysis.
DigitalSlideArchive/tifftools
Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.
DigitalSlideArchive/CNNCellDetection
This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei in histology images
DigitalSlideArchive/HistomicsStream
A whole-slide image reader for TensorFlow
DigitalSlideArchive/DSA-WSI-DeID
A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
DigitalSlideArchive/digitalslidearchive.info
Documentation for installing and maintaining the Digital Slide Archive, Girder, and HistomicsTK
DigitalSlideArchive/ImageDePHI
DigitalSlideArchive/ALBench
Benchmarking tool for evaluating Active Learning strategies for machine learning
DigitalSlideArchive/superpixel-classification
A test cli for classifying superpixels with arbitrary labels
DigitalSlideArchive/annotation-tracker
A Girder plugin for annotation tracking in HistomicsUI
DigitalSlideArchive/HistomicsDetect
A package for cell detection models using TensorFlow
DigitalSlideArchive/large-image-utilities
Experimental utilities for use with large_image
DigitalSlideArchive/wsi-superpixel-guided-labeling
DigitalSlideArchive/girder_volview
DigitalSlideArchive/ImageDePHI-Phase-I
Whole Slide Image Deidentification for PHI
DigitalSlideArchive/import-tracker
A Girder plugin for data import tracking in HistomicsUI
DigitalSlideArchive/large_image_source_isyntax
A large_image source using the Philips library for isyntax files
DigitalSlideArchive/dsa-run-custom-ai-models
DigitalSlideArchive/girder-client-mount
DigitalSlideArchive/histoqc-dsa-plugin
DigitalSlideArchive/DigitalSlideArchive.github.io
This is a redirect to the main documentation
DigitalSlideArchive/dive-dsa
DIVE for Digital Slide Archive
DigitalSlideArchive/girder-clamav
DigitalSlideArchive/girder_assetstore
A Girder plugin for connecting remote Girder instances as Assetstores
DigitalSlideArchive/histomics-tour
DigitalSlideArchive/histomics_load_testing
DigitalSlideArchive/histomicstk-extras
DigitalSlideArchive/HTAN