DimmestP/chimera-quantseq

Issues

• Which version of Phred score does the pipeline use?

  #17 opened 3 years ago
  1

• GFF files are not imported to IGB correctly

  #16 opened 3 years ago
  2

• pPGK1 quantseq behaviour

  #15 opened 3 years ago
  5

• Use or remove UMI's in 5PSeq

  #14 opened 3 years ago
  0

• Change URA3 demarcation in gtf

  #13 opened 3 years ago
  1

• Quantseq Results Summary

  #12 opened 3 years ago
  1

• Pipeline currently ignores the undetermined sample of reads

  #11 opened 3 years ago
  0

• multiqc will not install from bioconda

  #10 opened 3 years ago
  0

• Each sample needs its own gff and fasta file

  #9 opened 3 years ago
  1

• Check why only 1/5 of reads are counted

  #8 opened 3 years ago
  5

• Construct counts and cumulative count graph

  #6 opened 3 years ago
  0

• Check SUN4 and TOS6 3'UTR length in this dataset

  #5 opened 3 years ago
  0

• HiSat2 20bp minimum read length

  #4 opened 3 years ago
  4

• Remove correct adapter sequences

  #3 opened 3 years ago
  0

• Run Quant Fwd workflow on Quant Rev Read 2s

  #1 opened 3 years ago
  0