Pinned Repositories
Bash
just a repository for my Bash scripts - mostly really standard genomics stuff
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Bioinformatics-project
A set of scripts used and miscellaneous items.
BS-Snper
CGI-HTML
Front-end dev
DolapoA.github.io
Flexton is an ultra-minimalist and responsive theme for Jekyll
easybuild-easyconfigs
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
gemBS
gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (WGBS).
getCoverage
Get the mean and median coverage of a set of raw fastq sequences.
Sprokka
A pipeline for SPAdes, Prokka and Roary
DolapoA's Repositories
DolapoA/Sprokka
A pipeline for SPAdes, Prokka and Roary
DolapoA/Bash
just a repository for my Bash scripts - mostly really standard genomics stuff
DolapoA/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
DolapoA/Bioinformatics-project
A set of scripts used and miscellaneous items.
DolapoA/BS-Snper
DolapoA/CGI-HTML
Front-end dev
DolapoA/DolapoA.github.io
Flexton is an ultra-minimalist and responsive theme for Jekyll
DolapoA/easybuild-easyconfigs
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
DolapoA/gemBS
gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (WGBS).
DolapoA/getCoverage
Get the mean and median coverage of a set of raw fastq sequences.
DolapoA/Machine_learning
DolapoA/nudup
NuDup -- Marks/removes duplicate molecules based on the molecular tagging technology used in NuGEN products.
DolapoA/NuMetRRBS
DolapoA/ProfileHRD
DolapoA/rest_variantValidator
REST Interface for VariantValidator. Includes docker container
DolapoA/Roary
Rapid large-scale prokaryote pan genome analysis
DolapoA/stp_tutorials
Working through tutorials for STP