DominikBuchner/BOLDigger

Issues

• Passing literal html to 'read_html' is deprecated and will be removed in a future version.

  #34 opened 6 months ago by gjeunen
  1

• BOLD Not Responding: Attempting Retry

  #24 opened a year ago by anilorun
  16

• windows: crash fixed by updating beautifulsoup4

  #31 opened 9 months ago by bwprice
  1

• Is BOLD blocking BOLDigger

  #25 opened a year ago by MonicaRYoung
  10

• error "Unable to complete operation on element with key out"

  #26 opened 7 months ago by Rishikeshklaxmi
  2

• BOLDigger hit type 2 overflagging

  #30 opened 9 months ago by AlvaroFueyo
  0

• Filter possible NUMTS from BOLDigger assignments

  #32 opened 7 months ago by AlvaroFueyo
  0

• Assigning BIN to top hits

  #33 opened 7 months ago by gjdury
  0

• Supspecies information dropped from best fitting hit

  #29 opened 10 months ago by naurasd
  2

• Private entry as top hit despite 100% similarity published entry available

  #28 opened 10 months ago by naurasd
  9

• Discrepancy between BOLDigger output and BOLD's identification engine

  #27 opened 10 months ago by naurasd
  3

• Ubuntu: rbcl fasta file run error

  #11 opened 2 years ago by Canxis
  4

• BOLD Not Responding: Attempting Retry

  #23 opened a year ago by onurdogan
  4

• Bold not responding

  #22 opened a year ago by frannasc
  2

• Include BOLD API extra data for corrected list of top hits?

  #21 opened 2 years ago by myoung02
  5

• trouble running jamp_hit and digger_hit

  #20 opened 2 years ago by filipamsmartins
  6

• Hymenoptera issue

  #19 opened 2 years ago by pollingmarcel
  7

• BOLD did not respond! several weeks?

  #16 opened 2 years ago by OndroV
  7

• API verificiation fails

  #18 opened 2 years ago by naurasd
  4

• Finding best fitting hit fails for JAMP and BOLDigger method

  #17 opened 2 years ago by naurasd
  4

• Long fasta files (>50 seqs) stop the identification engine

  #15 opened 2 years ago by vanessamata
  5

• Damaged BOLD records stop the identification engine

  #14 opened 2 years ago by DominikBuchner
  1

• ID description

  #13 opened 2 years ago by SaschaKrenek
  3

• No Matches break the ITS and rbcl ID Engine atm

  #12 opened 2 years ago by DominikBuchner
  0

• Best fitting hit incorrect

  #10 opened 2 years ago by naurasd
  4

• Correction of top hits via BOLD API not initiated

  #9 opened 2 years ago by naurasd
  9

• Dataframe index issues in boldblast_coi.py, with workaround

  #5 opened 2 years ago by ingotron
  12

• First hit on corrupt excel files

  #8 opened 3 years ago by DominikBuchner
  1

• Mac OSX tkinter.TclError - fix inside

  #3 opened 4 years ago by Tamtatatam
  2

• Upload fasta with more than 100 seqs?

  #6 opened 3 years ago by naurasd
  2

• xlsx output file error?

  #7 opened 3 years ago by naurasd
  3

• Wrong file format while using "JAMP pipeline"

  #4 opened 4 years ago by lukylulu
  3

• need to check end of fasta file

  #2 opened 4 years ago by OndroV
  2

• boldsystems switched to https protocol, this broke the code

  #1 opened 4 years ago by DominikBuchner
  0