DrB-S

Cecret

Nextflow workflow for our analysis of MonkeyPox

docker-builds

StaPH-B:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

Freyja_summarizer

Creates a summary file from Freyja aggregated data (aggregated-freyja.tsv)

Grandeur

heatcluster

Creates a heat map with an accompanying cluster map for a SNP matrix

monkeypox

Nextstrain build for monkeypox virus

mutation_profile

Identify the sequence context flanking SNPs of interest and screen for potential profiles/signatures of interest

rasusa

seqtk

Toolkit for processing sequences in FASTA/Q formats

staphb_toolkit

Python Toolkit for using containerized programs in either Singularity or Docker

DrB-S/heatcluster

Creates a heat map with an accompanying cluster map for a SNP matrix

DrB-S/Cecret

Nextflow workflow for our analysis of MonkeyPox

DrB-S/Freyja_summarizer

Creates a summary file from Freyja aggregated data (aggregated-freyja.tsv)

DrB-S/monkeypox

Nextstrain build for monkeypox virus

DrB-S/staphb_toolkit

Python Toolkit for using containerized programs in either Singularity or Docker

DrB-S/docker-builds

StaPH-B:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

DrB-S/Grandeur

DrB-S/mutation_profile

Identify the sequence context flanking SNPs of interest and screen for potential profiles/signatures of interest

DrB-S/rasusa

DrB-S/seqtk

Toolkit for processing sequences in FASTA/Q formats