Installing EvaNE v0.3.2

[pandorica-opens]

I am trying to install EvalNE v0.3.2 on python 3.6.12 on macOS and execute simple_example.py.

While executing
$conda install --file requirements.txt

the output is

error: numpy 1.15.1 is installed but numpy>=1.15.4 is required by {'pandas'}

Basically, it can be reproduced by following the installation guide:

$git clone https://github.com/Dru-Mara/EvalNE.git
$cd EvalNE
$pip3 install -r requirements.txt
$sudo python3 setup.py install

or

$git clone https://github.com/Dru-Mara/EvalNE.git
$cd EvalNE
$conda install --file requirements.txt
$sudo python3 setup.py install

By ignoring the error and later running

$cd examples/
$python3 simple_example.py

we obtain

evalne/utils/preprocess.py", line 523, in prep_graph G.remove_edges_from(G.selfloop_edges()) AttributeError: 'Graph' object has no attribute 'selfloop_edges'

I think the issue is that we need to specify the versions in the requirements more clearly, i.e. the versions of scipy, pandas, tqdm and matplotlib.

[Dru-Mara]

Hello,

Thank you for the bug report. Indeed, there was an issue with the requirement specification. I have just pushed a fix that should solve it and tested the library again on Python 3.6.12 and 2.7.18.

Specifically, the issue was with numpy which should have required version 1.15.4 and networkx, which should have required exactly version 2.2 (the last version available for both python2 and python3)

Please let us know if you encounter any other issues.