DucoG
I'm a PhD student at the Delft University of Technology, liquid biopsies for early Cancer Detection. Apart from my PhD project, I'm interested in MLengineering
Pinned Repositories
cancer-fragment-insert-size-analysis
fragment-foundation-model
gpt-scraper
my-wave-portal
PEsWGS-alignment-snakemake
shallowHRD
This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination Deficiency of a tumor based on the number of Large-scale Genomic Alterations (LGAs).
kobus-ci-example
pytorch-lightning
Pretrain, finetune and deploy AI models on multiple GPUs, TPUs with zero code changes.
exercise-collaborative
Exercise Code Refinery eScience center
DucoG's Repositories
DucoG/cancer-fragment-insert-size-analysis
DucoG/fragment-foundation-model
DucoG/gpt-scraper
DucoG/my-wave-portal
DucoG/PEsWGS-alignment-snakemake
DucoG/shallowHRD
This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination Deficiency of a tumor based on the number of Large-scale Genomic Alterations (LGAs).