/dl_on_bio

MIT LicenseMIT

datasets

  1. Alzheimer http://adni.loni.usc.edu/
  2. Grand Challenges in Biomedical Image Analysis https://grand-challenge.org/All_Challenges/
  3. academictorrents http://academictorrents.com/browse.php?search=&c6=1
  4. X-ray hand skeleton bone http://www.ipilab.org/BAAweb/
  5. Individual Cells http://www.allencell.org/image-data-downloads.html
  6. Cancer Imageing Archive
  7. MRI dataset

opensource software of image analysis

  1. list http://www0.cs.ucl.ac.uk/opensource_mia_ws_2012/links.html
  2. ANTs: Advanced Normalization Tools for Brain Image link

By disease

Breast Cancer

  1. Deep Learning for Identifying Metastatic Breast Cancer paper

Prostate Cancer

  1. Adversarial Networks for the Detection of Aggressive Prostate Cancer paper

By Imaging

MRI

  1. A Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction paper code

Pathological

  1. Deep learning as a tool for increased accuracy and efficiency of histopathological diagnosis paper
  2. Detecting Cancer Metastases on Gigapixel Pathology Images paper blog