Pinned Repositories
AutoBA
An AI Agent for Fully Automated Multi-omic Analyses
awesome-awesomeness-bioinformatics
A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas
bioinformatics_tool_recommendation
Conifer
Calculate confidence scores from Kraken2 output
DuttaAnik
fasteR
Fast Lane to Learning R!
ganttrify
Create beautiful Gantt charts with ggplot2
GATK_pipeline_customized
This is GATK pipeline customized for GBS/RAD/SLAF-seq data based SNP calling using HPC
genotype_plot
A set of functions to visualise genotypes based on a VCF
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
DuttaAnik's Repositories
DuttaAnik/AutoBA
An AI Agent for Fully Automated Multi-omic Analyses
DuttaAnik/awesome-awesomeness-bioinformatics
A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas
DuttaAnik/bioinformatics_tool_recommendation
DuttaAnik/Conifer
Calculate confidence scores from Kraken2 output
DuttaAnik/DuttaAnik
DuttaAnik/fasteR
Fast Lane to Learning R!
DuttaAnik/ganttrify
Create beautiful Gantt charts with ggplot2
DuttaAnik/GATK_pipeline_customized
This is GATK pipeline customized for GBS/RAD/SLAF-seq data based SNP calling using HPC
DuttaAnik/genotype_plot
A set of functions to visualise genotypes based on a VCF
DuttaAnik/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
DuttaAnik/imputation_plant_breeding
Scripts for our plant breeding imputation manuscript.
DuttaAnik/iSeq
Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
DuttaAnik/kraken-protocol
Metagenome analysis using the Kraken software suite
DuttaAnik/microGWAS
Bacterial GWAS analysis
DuttaAnik/miller
Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON
DuttaAnik/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
DuttaAnik/nextflow-pipelines
Scripts for bioinformatics analysis of sequencing data
DuttaAnik/rich-msa
A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
DuttaAnik/Telomere-telomere-genome-analysis-workflow-of-Plasmodiophora-brassicae
DuttaAnik/Wild-tomato-genomics