Pinned Repositories
BPDCN
Scripts used to generate results for BPDCN paper (Fall 2021)
cellHarmony
A tool for combining single-cell RNA-sequencing data sets for differential expression analysis
Chapter4
Code for reproducing the figures from my dissertation Chapter 4
DoubletDecon
A tool for removing doublets from single-cell RNA-seq data
EricasFunctions
A comprehensive set of functions written by or frequently used by Erica DePasquale in her bioinformatics work. Use at your own risk!
KRSA
A tool for determining differential kinase activity from kinome array data
Mitochondrial_variants
Peters-single-cell
Scripts used to generate data for the Peters lab publication with single cell data in 2024
Practicum
Code for Practicum/Spring 2018
Shivakumar-MBO
Code for analysis and figure generation for Ayabe et al. 2024
EDePasquale's Repositories
EDePasquale/DoubletDecon
A tool for removing doublets from single-cell RNA-seq data
EDePasquale/Mitochondrial_variants
EDePasquale/BPDCN
Scripts used to generate results for BPDCN paper (Fall 2021)
EDePasquale/EricasFunctions
A comprehensive set of functions written by or frequently used by Erica DePasquale in her bioinformatics work. Use at your own risk!
EDePasquale/Peters-single-cell
Scripts used to generate data for the Peters lab publication with single cell data in 2024
EDePasquale/cellHarmony
A tool for combining single-cell RNA-sequencing data sets for differential expression analysis
EDePasquale/Chapter4
Code for reproducing the figures from my dissertation Chapter 4
EDePasquale/KRSA
A tool for determining differential kinase activity from kinome array data
EDePasquale/Practicum
Code for Practicum/Spring 2018
EDePasquale/Shivakumar-MBO
Code for analysis and figure generation for Ayabe et al. 2024