These scripts allow you to refine the genomes generated by the three binning software programs including MaxBin2, MetaBAT and CONCOCT.
- Use S1_BinsAbundance_PE_connections.py to refine bins by PE Tracing.
- Use S2_Bins_comparator_within_group.py to choose the best bins from each binning software.
- Use S3_Multiple_Assembly_Comparitor.py to choose the best bins within three binning software.
- Use S4_Outlier_remover.py to refine the bins by removing contig.
- Use S5_Contig_retriever.py to refine the bins by retrieving contig.