EMSL Computing

Pinned Repositories

CoreMS
CoreMS is a comprehensive mass spectrometry software framework
Language:Python52 8 525
CoreMS-Portal
Language:JavaScript7 3 00
Day3-EMSL-SummerSchool-2022
Language:Jupyter Notebook4 3 01
EnviroMS
EnviroMS is a software for natural organic matter data processing and annotation
Language:Python4 5 02
ftmsRanalysis
Language:R26 11 139
grip-tomo
docs: https://grip-tomo.readthedocs.io/en/latest/
Language:Python3 4 03
PeakDecoder
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
Language:R13 2 05
Pore2Chip
A python package that takes XCT images of porous materials and generates representative lab-on-chip micromodels
Language:Python5 4 00
pspecterlib
Proteomics R package for matching peptide fragments for both digested and intact proteomics
Language:R8 2 11
TMSig
An R package containing tools to prepare, analyze, and visualize named lists of sets, with an emphasis on molecular signatures (such as gene sets).
Language:R4 4 10

EMSL Computing's Repositories

EMSL-Computing/CoreMS
CoreMS is a comprehensive mass spectrometry software framework
Language:Python52 8 525
EMSL-Computing/ftmsRanalysis
Language:R26 11 139
EMSL-Computing/PeakDecoder
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
Language:R13 2 05
EMSL-Computing/pspecterlib
Proteomics R package for matching peptide fragments for both digested and intact proteomics
Language:R8 2 11
EMSL-Computing/CoreMS-Portal
Language:JavaScript7 3 00
EMSL-Computing/Pore2Chip
A python package that takes XCT images of porous materials and generates representative lab-on-chip micromodels
Language:Python5 4 00
EMSL-Computing/Day3-EMSL-SummerSchool-2022
Language:Jupyter Notebook4 3 01
EMSL-Computing/EnviroMS
EnviroMS is a software for natural organic matter data processing and annotation
Language:Python4 5 02
EMSL-Computing/TMSig
An R package containing tools to prepare, analyze, and visualize named lists of sets, with an emphasis on molecular signatures (such as gene sets).
Language:R4 4 10
EMSL-Computing/FREDA
Language:HTML3 7 61
EMSL-Computing/grip-tomo
docs: https://grip-tomo.readthedocs.io/en/latest/
Language:Python3 4 03
EMSL-Computing/MetaMS
Language:Python3 5 01
EMSL-Computing/nmRanalysis
Language:R3 3 02
EMSL-Computing/PSpecteR
The PSpecteR users manual can be accessed via the weblink below
Language:HTML3 4 31
EMSL-Computing/isoforma-lib
R package for the relative quantitation of proteoforms with MS2 fragmentation patterns
Language:R2 3 20
EMSL-Computing/MetaCycData
Language:R2 6 01
EMSL-Computing/CoreMS-AutoUpload
Instrument deployed Auto Uploader integrated with CoreMS-Portal.
Language:Python1 4 0
EMSL-Computing/dimpl
Language:R1 2 00
EMSL-Computing/CCSz-demo
Python and R scripts with examples demonstrating the conversion of IM-MS raw data to CCS/z space.
Language:Python0 4 00
EMSL-Computing/IsoForma-paper
Language:HTML0 2 10
EMSL-Computing/RBD-intact-peak-analysis
Language:R0 2 00
EMSL-Computing/mapDataAccess-lib
Language:R