Pinned Repositories
afrods
An R package containing data on key fields for African countries
beginR
Provides tutorials to begin smoothly in R
corebiota
Probabilistic partition of count data to identify core species
darwin
Create (rapid) neighbor-joining tree from sequences using mash distance
fastchaos
(Integer) chaos game representation for DNA sequences
hkgfinder
Find housekeeping genes in prokaryotic (meta)genomic data
hyperex
Hypervariable region primer-based extractor for 16S rRNA and other SSU/LSU sequences.
presentations
sabreur
fast, reliable and handy demultiplexing tool for fastx files
xgt
Efficient and fast querying and parsing of GTDB's data
Ebedthan's Repositories
Ebedthan/xgt
Efficient and fast querying and parsing of GTDB's data
Ebedthan/sabreur
fast, reliable and handy demultiplexing tool for fastx files
Ebedthan/hkgfinder
Find housekeeping genes in prokaryotic (meta)genomic data
Ebedthan/hyperex
Hypervariable region primer-based extractor for 16S rRNA and other SSU/LSU sequences.
Ebedthan/corebiota
Probabilistic partition of count data to identify core species
Ebedthan/fastchaos
(Integer) chaos game representation for DNA sequences
Ebedthan/aebou_blog
My personnal website
Ebedthan/darwin
Create (rapid) neighbor-joining tree from sequences using mash distance
Ebedthan/rust-catfish
Read and Write Catfish files
Ebedthan/align-rs
Ebedthan/arc
Ebedthan/arewebioyet.github.io
Rust in bioinformatics and computational biology
Ebedthan/bakta-web-ui
UI for Bakta web app
Ebedthan/biometrie
Ebedthan/clap
A full featured, fast Command Line Argument Parser for Rust
Ebedthan/containers
Bioinformatics containers
Ebedthan/cutadapt
Cutadapt removes adapter sequences from sequencing reads
Ebedthan/datamashphage
Ebedthan/ebedthan.github.io
Personal website
Ebedthan/elrd
Module 1 of cs course in french
Ebedthan/ggplot2
An implementation of the Grammar of Graphics in R
Ebedthan/git-cliff
A highly customizable Changelog Generator that follows Conventional Commit specifications ⛰️
Ebedthan/mashphage
Fast and accurate whole-genome clustering of (actino) bacteriophages
Ebedthan/mbdr
Modelling biological data with R
Ebedthan/new-git-project
Ebedthan/niffler
Simple and transparent support for compressed files.
Ebedthan/rhizoserver
The rhizobia server
Ebedthan/rust-bloom-filter
A fast Bloom filter implementation in Rust
Ebedthan/rust-msbwt
place for building up a msbwt resource in Rust
Ebedthan/test