EdGreen21

Molecular biologist / Bioinformatician

DKFZGermany

Pinned Repositories

ALICE
Detecting TCR involved in immune responses from single RepSeq datasets
Language:R0 2 00
docker-pvactools
Language:Dockerfile0 2 00
Docker_seq2HLA
Dockerised hla2seq2.2
Language:Shell0 2 00
ERGO
ERGO is a deep learing based model for predicting TCR-peptide binding.
Language:Python00
gliph
Grouping of Lymphocyte Interactions by Paratope Hotspots
Language:Perl00
ht-primer-design
Language:R0 2 00
ImmunoNodes
Language:Python0 2 00
MixMHCpred
HLA-I ligand predictor
21
OptiType
Precision HLA typing from next-generation sequencing data
Language:Python0 2 00
Pulmonary-Data-Merge
R code for merging pulmonary data files
Language:R00

EdGreen21's Repositories

EdGreen21/MixMHCpred
HLA-I ligand predictor
21
EdGreen21/ALICE
Detecting TCR involved in immune responses from single RepSeq datasets
Language:R0 2 00
EdGreen21/docker-pvactools
Language:Dockerfile0 2 00
EdGreen21/Docker_seq2HLA
Dockerised hla2seq2.2
Language:Shell0 2 00
EdGreen21/ERGO
ERGO is a deep learing based model for predicting TCR-peptide binding.
Language:Python00
EdGreen21/gliph
Grouping of Lymphocyte Interactions by Paratope Hotspots
Language:Perl00
EdGreen21/ht-primer-design
Language:R0 2 00
EdGreen21/ImmunoNodes
Language:Python0 2 00
EdGreen21/OptiType
Precision HLA typing from next-generation sequencing data
Language:Python0 2 00
EdGreen21/Pulmonary-Data-Merge
R code for merging pulmonary data files
Language:R00
EdGreen21/pVACtools
Language:Python
EdGreen21/TAPseq
R package to design PCR primers for TAP-seq
EdGreen21/TIDAL
Transposon Insertion and Depletion AnaLyzer
Language:C2 0
EdGreen21/vdjfasta
A toolkit for repertoire analysis of antibodies and T cell receptors