Pinned Repositories
uproteins
rp3
Ribosome Profiling and Proteogenomics Pipeline (RP3) for the identification of novel microproteins encoded by smORFs
bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data
euproteins
gb-to-ptt
Generates ptt and nrt tables from a genbank file.
ligand-merger
predict_orf
sgRNA_predictor
Scripts for sgRNA primer prediction. Optimized for the Mycobacterium genus.
toolkit
transcriptomics_toolkit
useful scripts for transcriptomics analysis
Eduardo-vsouza's Repositories
Eduardo-vsouza/rp3
Ribosome Profiling and Proteogenomics Pipeline (RP3) for the identification of novel microproteins encoded by smORFs
Eduardo-vsouza/uproteins
Eduardo-vsouza/predict_orf
Eduardo-vsouza/toolkit
Eduardo-vsouza/transcriptomics_toolkit
useful scripts for transcriptomics analysis
Eduardo-vsouza/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data
Eduardo-vsouza/euproteins
Eduardo-vsouza/gb-to-ptt
Generates ptt and nrt tables from a genbank file.
Eduardo-vsouza/ligand-merger
Eduardo-vsouza/sgRNA_predictor
Scripts for sgRNA primer prediction. Optimized for the Mycobacterium genus.