Allen Human Gene Expression Atlas Samples Mapped to Individual and Common (fsaverage) Space

  1. Freesurfer V.6 pial/white matter cortical surface reconstructions using both T1-weight and T2-weighted MRIs for all 6 subjects:
  • H0351.1009
  • H0351.1012
  • H0351.1015
  • H0351.1016
  • H0351.2001
  • H0351.2002

Reconstrucitons are available under data/images/reconall.

Note: T2-weighted MRIs were used to improve accuracy of pial surface reconstruction.

  1. Cortical samples were extracted and they were mapped onto white matter surface.

  2. Circular surface-based region-of-interests (ROIs) with 5 mm radius were created for each sample and is available for download under data/images/reconall/<subject>/samples/labels_in_subject_space)

  3. Circular ROIs were mapped to fsaverage space and are available for download under data/images/reconall/<subject>/samples/labels_in_fsaverage_space

ROIs