Visualizing FreeSurfer's outputs in Brainsight.
A simple code to visualize Freesurfer cortical parcellations in Brainsight for TMS stimulation.
How it works:
After processing your subject with Freesurfer, run fs2brainsight as follows in your terminal:
bash fs2brainsight.sh <subjid> Note that SUBJECTS_DIR should be set to your SUBJECTS_DIR. The outputs can be found under subjid/mri/?h-*-in-brainsight.nii.gz.