Pinned Repositories
DSF_Fall2023
Learning Logs from DSF Program
Melanoma_Progression_Gene_Analysis
NeoPrioMo
Process_peptide_lists
pTuneos
pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data
Run_fastclone_pipeline
Human_SCC_data
pairtree
Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneity. Pairtree focuses on scaling to many more cancer samples and cancer cell subpopulations than other algorithms, and on producing concise and informative interactive characterizations of posterior uncertainty.
decifer
DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell fractions (DCF).
Viral_HCC_Sex_Diff
ElizabethBorden's Repositories
ElizabethBorden/NeoPrioMo
ElizabethBorden/Process_peptide_lists
ElizabethBorden/Run_fastclone_pipeline
ElizabethBorden/DSF_Fall2023
Learning Logs from DSF Program
ElizabethBorden/Melanoma_Progression_Gene_Analysis
ElizabethBorden/pTuneos
pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data