Pinned Repositories
biobb_md
Biobb_md is the Biobb module collection to perform molecular dynamics simulations.
exams
Personal fork of R/exams — Automatic Generation of Exams in R. Homepage: http://www.R-exams.org/ Report bugs for this package: http://www.R-exams.org/contact/
f90nml
A Python module and command line tool for working with Fortran namelists. Case-sensitive for Molsim input.
hearts-gym
Multi-agent Hearts card game environment
JSC-easybuild
This is the public easybuild repository of JSC.
MDBenchmark
Quickly generate, start and analyze benchmarks for molecular dynamics simulations.
molsim
Personal fork of Per Linse's MOLSIM. Used to develop new features I need in my research.
numpy_scf
Self-Consistent Field methods written using NumPy
orgmk
Automate export (PDF, HTML, etc.) of Org documents
speadi
A Python package that aims to characterise the dynamics of local chemical environments from Molecular Dynamics trajectories of proteins and other biomolecules. Public mirror of https://gitlab.jsc.fz-juelich.de/slbio/speadi.
EmileDeBruyn's Repositories
EmileDeBruyn/biobb_md
Biobb_md is the Biobb module collection to perform molecular dynamics simulations.
EmileDeBruyn/exams
Personal fork of R/exams — Automatic Generation of Exams in R. Homepage: http://www.R-exams.org/ Report bugs for this package: http://www.R-exams.org/contact/
EmileDeBruyn/f90nml
A Python module and command line tool for working with Fortran namelists. Case-sensitive for Molsim input.
EmileDeBruyn/hearts-gym
Multi-agent Hearts card game environment
EmileDeBruyn/JSC-easybuild
This is the public easybuild repository of JSC.
EmileDeBruyn/MDBenchmark
Quickly generate, start and analyze benchmarks for molecular dynamics simulations.
EmileDeBruyn/molsim
Personal fork of Per Linse's MOLSIM. Used to develop new features I need in my research.
EmileDeBruyn/numpy_scf
Self-Consistent Field methods written using NumPy
EmileDeBruyn/orgmk
Automate export (PDF, HTML, etc.) of Org documents
EmileDeBruyn/orgmk-dockerfile
Dockerfile for a container with full capabilities to convert orgmode files on the command line using orgmk.
EmileDeBruyn/sbi_intro
Tutorial on Simulation Based Inference
EmileDeBruyn/viparr
Parameterize chemical systems for Desmond and Anton.