/fastqe

FASTQ sequence quality visualisation with Emoji

Primary LanguagePython

fastqe

FASTQ with Emoji

Given a fastq file in Illumina 1.8+/Sanger format, calculate the mean (rounded) score for each position and print a corresponding emoji!

Example

Dependencies

  • pyemojify
  • BioPython
  • NumPy

Todo

  • Rearange emoji to use more realistic ranges (i.e > 60 use uncommon emoji)
  • Add requirements.txt with versions