Pinned Repositories
biglasso
biglasso: Extending Lasso Model Fitting to Big Data in R
bonito
Bonito - A PyTorch Basecaller for Oxford Nanopore Reads
Clair3
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
dorado
A LibTorch Basecaller for Oxford Nanopore Reads
epiGWAS
Causal inference for interaction detection
GenomeWorks
SDK for GPU accelerated genome assembly and analysis
kernelPSI
Nonlinear post-selection inference
pycuda
WHInter
Brand and Bound for Interaction detection
EpiSlim's Repositories
EpiSlim/kernelPSI
Nonlinear post-selection inference
EpiSlim/epiGWAS
Causal inference for interaction detection
EpiSlim/WHInter
Brand and Bound for Interaction detection
EpiSlim/biglasso
biglasso: Extending Lasso Model Fitting to Big Data in R
EpiSlim/bonito
Bonito - A PyTorch Basecaller for Oxford Nanopore Reads
EpiSlim/Clair3
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
EpiSlim/deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
EpiSlim/dorado
A LibTorch Basecaller for Oxford Nanopore Reads
EpiSlim/GenomeWorks
SDK for GPU accelerated genome assembly and analysis
EpiSlim/pycuda
EpiSlim/regenie
regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.
EpiSlim/sgkit
Statistical genetics toolkit
EpiSlim/vllm
A high-throughput and memory-efficient inference and serving engine for LLMs