ErillLab/collectf

Issues

• Set up DB backup cron jobs.

  #64 opened 9 years ago by sefakilic
  0

• Clean up expired sessions with a cron job

  #76 opened 9 years ago by sefakilic
  0

• incorporate collecTF logo to site

  #49 opened 9 years ago by ivanerill
  1

• Footer doesn't scale properly.

  #53 opened 9 years ago by sefakilic
  1

• Search by gene and locus tag

  #75 opened 9 years ago by sefakilic
  0

• gene db linkouts link to generic NCBI gene page

  #74 opened 9 years ago by ivanerill
  0

• pubmed ID in uniprot report page

  #42 opened 9 years ago by ivanerill
  0

• regulon link in curation page

  #41 opened 9 years ago by ivanerill
  0

• add search by TF name, species name

  #45 opened 9 years ago by ivanerill
  1

• external DB tab in report pages

  #46 opened 9 years ago by ivanerill
  1

• site position in uniprot report page

  #40 opened 9 years ago by ivanerill
  0

• Curation form: genome and TF accession step.

  #35 opened 9 years ago by sefakilic
  0

• Make TF and TF-family name fields unique.

  #52 opened 9 years ago by sefakilic
  0

• Use 'redirect' rather than 'HttpResponseRedirect'

  #51 opened 9 years ago by sefakilic
  0

• add features

  #57 opened 9 years ago by ivanerill
  0

• add a "Find a genome to search" link

  #56 opened 9 years ago by sefakilic
  1

• outlinks/descriptions TFs/species list

  #71 opened 9 years ago by ivanerill
  1

• PMID/PFAM linkout functionality

  #70 opened 9 years ago by ivanerill
  0

• ensemble report missing in browse by tf family

  #73 opened 9 years ago by ivanerill
  1

• summary TF page

  #72 opened 9 years ago by ivanerill
  0

• Taxonomy bug: "Cannot fetch taxonomy strain information"

  #69 opened 9 years ago by sefakilic
  1

• Make CollecTF release available

  #65 opened 9 years ago by sefakilic
  1

• "export data" in motif report page is broken

  #66 opened 9 years ago by sefakilic
  0

• crowded gene regulation diagram

  #68 opened 9 years ago by sefakilic
  0

• [Django] ERROR (EXTERNAL IP): Internal Server Error: /curate/add_pubmed/

  #31 opened 9 years ago by sefakilic
  1

• sidebar menu missing in some pages

  #63 opened 9 years ago by ivanerill
  0

• Links to NCBI gene database are broken

  #67 opened 9 years ago by sefakilic
  0

• Name the search box "Quick search"

  #55 opened 9 years ago by sefakilic
  0

• Home message

  #61 opened 9 years ago by ivanerill
  0

• update curator's roster & acknowledgements

  #62 opened 9 years ago by ivanerill
  0

• CollecTF GO technique assessment

  #59 opened 9 years ago by ivanerill
  0

• Define TF-associated GO terms for gene-centric GO annotations

  #60 opened 9 years ago by ivanerill
  0

• ECO-CollecTF integration

  #58 opened 9 years ago by ivanerill
  0

• non-standard refseq accessions

  #54 opened 9 years ago by ivanerill
  0

• pip install registration module

  #50 opened 9 years ago by sefakilic
  0

• Biopython deprecated Bio.Motif module

  #34 opened 9 years ago by sefakilic
  1

• browse by technique

  #43 opened 9 years ago by ivanerill
  1

• Combined report fails to incorporate all data in ensemble view

  #44 opened 9 years ago by ivanerill
  1

• Move list of all TFs/species/techniques under "browse"

  #27 opened 9 years ago by sefakilic
  1

• Internal Server Error: /browse/motif_similarity_measure/

  #32 opened 9 years ago by sefakilic
  1

• motif comparison page

  #37 opened 9 years ago by sefakilic
  2

• Motif comparison: alignment

  #48 opened 9 years ago by sefakilic
  1

• link to taxonomic motif browsing

  #47 opened 9 years ago by ivanerill
  0

• Cron job to generate motif file for MEME Suite

  #39 opened 9 years ago by sefakilic
  0

• Cron job to generate UniProt dbxref file

  #38 opened 9 years ago by sefakilic
  0

• Use external database accessions

  #36 opened 9 years ago by sefakilic
  0

• Add a page for the list of species

  #26 opened 9 years ago by sefakilic
  0

• Link TF and TF-instance tables

  #30 opened 9 years ago by sefakilic
  3

• Database consistency check

  #28 opened 9 years ago by sefakilic
  1

• UniProt migration documentation

  #29 opened 9 years ago by sefakilic
  0