EugeneKim76

Physicist, Bioinformatician

Seoul National University (NICEM, Genome Analysis Center)

Pinned Repositories

Ab10-Assembly
B73Ab10 genome assembly methods
Language:Python16 4 56
wf-human-variation
Language:Nextflow105 14 22745
Ab10-Assembly
B73Ab10 genome assembly methods
Language:Python0 0 00
samsa2
SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customizable reference databases.
Language:R0 0 00
teHmm
Prototype code for identification of transposable elements in annotated DNA sequence using a HMM.
Language:Python00
Unicycler
hybrid assembly pipeline for bacterial genomes
Language:C++0 0 00
Spectre
Copy number caller for long read data including SNV utilization
Language:Python53 9 333
samsa2
SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customizable reference databases.
Language:R56 5 7236

EugeneKim76's Repositories

EugeneKim76/Ab10-Assembly
B73Ab10 genome assembly methods
Language:Python0 0 00
EugeneKim76/samsa2
SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customizable reference databases.
Language:R0 0 00
EugeneKim76/teHmm
Prototype code for identification of transposable elements in annotated DNA sequence using a HMM.
Language:Python00
EugeneKim76/Unicycler
hybrid assembly pipeline for bacterial genomes
Language:C++0 0 00