Evotec-Bioinformatics

Hamburg

Pinned Repositories

BAMscale
BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.
Language:C00
evoGO
Gene Ontology (GO) enrichment analysis
Language:R71
libBigWig
A C library for handling bigWig files
Language:C00
ml-from-omics
Code required to reproduce results from the book chapter "Machine learning from omics data" (Springer Protocols, 2021)
Language:Python14 4 01
mutsig
Lightweight tool to calculation mutation signatures from (multi-sample) VCF files
Language:Rust00
rbcf
R Bindings for htslib/bcf
Language:C01
rBigWig
R Wrapper for libbigwig
Language:R00
vcf-info2format
A small utility that transfers INFO tags into the FORMAT in a single-sample VCF
Language:Rust00

Evotec-Bioinformatics/ml-from-omics
Code required to reproduce results from the book chapter "Machine learning from omics data" (Springer Protocols, 2021)
Language:Python14 4 01
Evotec-Bioinformatics/evoGO
Gene Ontology (GO) enrichment analysis
Language:R71
Evotec-Bioinformatics/BAMscale
BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.
Language:C00
Evotec-Bioinformatics/libBigWig
A C library for handling bigWig files
Language:C00
Evotec-Bioinformatics/mutsig
Lightweight tool to calculation mutation signatures from (multi-sample) VCF files
Language:Rust00
Evotec-Bioinformatics/rbcf
R Bindings for htslib/bcf
Language:C01
Evotec-Bioinformatics/rBigWig
R Wrapper for libbigwig
Language:R00
Evotec-Bioinformatics/vcf-info2format
A small utility that transfers INFO tags into the FORMAT in a single-sample VCF
Language:Rust00