installing and building fastq-join on a linux server.

Question

installing and building fastq-join on a linux server.

Opened this issue 7 years ago · 6 comments

Hello,

I am new to the command line and would appreciate help getting started with fastq-join. Can anyone give direction for how to install and build ea-utils on a linux server once the files have been downloaded and unzipped?

Thank you!

Answer 1 · 2017-07-13T20:47:52.000Z

You should be able to just type make at the command line and the executables will be built for you, https://github.com/ExpressionAnalysis/ea-utils/blob/wiki/Compiling.md

Answer 2 · 2017-07-13T20:50:43.000Z

Thank you for the quick response. I am in the ExpressionAnalysis-ea-utils-bd148d4 directory and typed in make but am given this error:

make: *** No targets specified and no makefile found. Stop.

Answer 3 · 2017-07-13T20:54:28.000Z

cd into the clipper directory and you should see the Makefile there. Try the make command in that directory

Answer 4 · 2017-07-13T21:09:36.000Z

Yeah, that seems like a configuration problem. Sorry, seems like you can't avoid IT

Answer 5 · 2017-07-13T21:11:27.000Z

I was worried about that - thanks for your help!

Answer 6 · 2018-10-03T07:57:50.000Z

how did you resolve it