ExpressionAnalysis/ea-utils

Issues

• Segmentation fault and core dump

  #70 opened 6 years ago by carlyraea
  1

• Add support for 0 length reads in fastq-mcf

  #53 opened 8 years ago by drsuuzzz
  1

• Can we have a complete tutorial for ea-utils with demo data

  #85 opened 2 years ago by gens8094
  0

• New release?

  #84 opened 3 years ago by snehring
  0

• Fails to compile: can't locate t/test-prep.pl, test errors

  #49 opened 8 years ago by plantarum
  4

• make FAIL tests on Mac OS X Sierra

  #77 opened 6 years ago by mkazanov
  1

• sam-stats doesn't support -o and -O option

  #25 opened 9 years ago by GoogleCodeExporter
  4

• bed file which generated by gtf2bed has score all 0

  #83 opened 4 years ago by lida-R
  0

• How to set prefix for make?

  #82 opened 4 years ago by BJWiley233
  1

• fastq-mcf fails with exit code 136: Floating point exception

  #81 opened 4 years ago by shengbing
  0

• Please clarify software license

  #80 opened 4 years ago by JAttig
  0

• Install ea-utlis without sudo```

  #79 opened 4 years ago by MonicaSteffi
  0

• trimmed one more nucleotide base I want to keep

  #78 opened 5 years ago by aiminy
  0

• Failed test: make: *** [check] Error 1 on Mac(Mojave10.14.2)

  #73 opened 6 years ago
  2

• fastq-multx not identifying barcodes

  #60 opened 8 years ago by SJRussell
  8

• Version conflict issue

  #76 opened 6 years ago by shubhambasu
  0

• Sparsehash update recommendation

  #75 opened 6 years ago by PhilipDeegan
  0

• Nextera/Dual Indexed input demultiplexing

  #74 opened 6 years ago by amr15
  0

• Make install doesn't work on Mac

  #72 opened 6 years ago by nachishankar
  0

• fastq-mcf sink into dead circulation when getopt_long

  #71 opened 6 years ago by songdongmei
  0

• installing and building fastq-join on a linux server.

  #67 opened 7 years ago by tbranck28
  6

• gtf2bed does not recognize GFF when tab is present between gff and the version number line 1

  #69 opened 6 years ago by splaisan
  0

• fastq-join

  #68 opened 7 years ago by malihaaziz
  0

• Compilation on Mac

  #32 opened 9 years ago by GoogleCodeExporter
  4

• number overflow

  #61 opened 8 years ago by wandai330
  0

• No output when running fastq-mcf

  #59 opened 8 years ago by youngchan919
  2

• Illumina PF filtering not working

  #45 opened 8 years ago by mitros
  1

• Please use release tags

  #50 opened 8 years ago by tillea
  1

• Error Installing ea utils on Mac (OSX 10.7.5 Lion)

  #57 opened 8 years ago by oakeseh
  0

• ea-utils error in MAC

  #52 opened 8 years ago by raqxavier
  1

• It is not Multi-threading

  #51 opened 8 years ago by NitinMandloi
  1

• Barcode in the reverse reads

  #48 opened 8 years ago by ptranvan
  0

• installing ea-utils on windows7

  #42 opened 9 years ago by GoogleCodeExporter
  1

• gsl_randist.h: No such file or directory

  #43 opened 9 years ago by GoogleCodeExporter
  1

• Use fastq-mcf with methylation data

  #41 opened 9 years ago by GoogleCodeExporter
  2

• Patches for porting ea-utils to other POSIX platforms + warnings clean-up

  #40 opened 9 years ago by GoogleCodeExporter
  1

• gtf2bed wrong output.

  #37 opened 9 years ago by GoogleCodeExporter
  1

• compilation error because sparsehash/sparse_hash_map is not found

  #38 opened 9 years ago by GoogleCodeExporter
  1

• "fastq-mcf has stopped working"

  #39 opened 9 years ago by GoogleCodeExporter
  0

• fastq-mcf not working correctly on ubuntu 14.04

  #35 opened 9 years ago by GoogleCodeExporter
  9

• error message: "fastq-mcf has stopped working"

  #36 opened 9 years ago by GoogleCodeExporter
  4

• Wrong number (/ counter / calculation) in summary statistics of fastq-mcf

  #34 opened 9 years ago by GoogleCodeExporter
  2

• Giant FASTQ support in stats

  #33 opened 9 years ago by GoogleCodeExporter
  3

• fastq-multx when barcode is in header between # and / symbols?

  #30 opened 9 years ago by GoogleCodeExporter
  7

• fastq-multx supporting sequence in header

  #31 opened 9 years ago by GoogleCodeExporter
  1

• Limit on the number of files it can handle

  #29 opened 9 years ago by GoogleCodeExporter
  1

• The gtf2bed script generate bed with wrong chrStart and chrEnd coordinates for plus strand

  #28 opened 9 years ago by GoogleCodeExporter
  4

• Incorrect total reads when using FIFO

  #26 opened 9 years ago by GoogleCodeExporter
  2

• fastq-mcf: invalid adapter file ==> Floating point exception

  #27 opened 9 years ago by GoogleCodeExporter
  1

• fastq-mcf: Allow merging multiple FASTQ input files to one (or two in case of paired-end) cleaned fastq file

  #24 opened 9 years ago by GoogleCodeExporter
  4