ExpressionAnalysis/ea-utils

Issues

• Add "make clean" target to Makefile

  #23 opened 9 years ago
  3

• --max-ns 0 does not seem to work, still getting reads with Ns

  #22 opened 9 years ago
  6

• sam-stats fails to properly deduce unmapped reads and snp (ins/del) rate

  #21 opened 9 years ago
  6

• sam-stats is not installed

  #20 opened 9 years ago
  1

• ea-utils621-win fastq-stats and fastq-mcf not working

  #19 opened 9 years ago
  3

• make: *** [fastq-mcf] Error 1

  #18 opened 9 years ago
  13

• make install failing because it can't find gsl-randist.h

  #17 opened 9 years ago
  4

• issue with gtf2bed

  #16 opened 9 years ago
  2

• The N-percent maximum difference

  #15 opened 9 years ago
  2

• Inconsistant fastq-mcf between servers

  #14 opened 9 years ago
  8

• Has anyone been able to compile EA utils on Moutain Lion?

  #13 opened 9 years ago
  9

• fastq-mcf does not process all fasta entries

  #12 opened 9 years ago
  10

• fastq-multx

  #11 opened 9 years ago
  2

• fastq-stats make error: google/sparse_hash_map: No such file or directory

  #10 opened 9 years ago
  15

• mapped bases didn't output

  #9 opened 9 years ago
  4

• sam-stats not compiled by make

  #8 opened 9 years ago
  2

• no ea-utils.spex file

  #7 opened 9 years ago
  2

• Error opening file 'GFI-410.fastq': Value too large for defined data type

  #6 opened 9 years ago
  7

• fastq-mcf doesn't work on Lion

  #5 opened 9 years ago
  12

• fastq-join does not work on set of (fastq-mcf) trimmed seqs, although it works perfectly for each seq seperately

  #4 opened 9 years ago
  6

• GNU 'getline' function causes g++ to fail on OS X

  #3 opened 9 years ago
  16

• Odd adapter parsing

  #2 opened 9 years ago
  10

• fastq-mcf doesn't clip... even if it finds things to clip

  #1 opened 9 years ago
  0