FKiffer

Pinned Repositories

19AFemalesSurvival
Statistics for survival analyses of the NSRL19A Females project
Language:HTML0 1 01
19AMalesHazardRatios
Statistical analyses for mouse survival
Language:Jupyter Notebook0 0 00
19C
R notebooks for for statistical reporting of the NSRL19C project
Language:HTML0 1 00
AllenBrainAtlasCircularDendrogram-Mouse-CCFv3-
An exhaustive R-based circular dendrogram depicting the complete hierarchy of the Allen mouse brain atlas (CCFv3). This circular graph object can be transformed and included in analyses workflows for visualizing global or focused network information data of the global mouse brain.n
01
Deepethogram-Processing
Simple scripts to quickly process the output files from deepethogram with the most common behavioral measures
Language:Python00
DeepLabCut
Experimental implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
Language:Python0 0 00
deeplabcut-social-interaction
An application that cleans the pose estimation output from DeepLabCut and produces a CSV file containing information for the rodent social interaction test. Additionally, the application has a feature that allows for live video analysis of the behavioral test. This application was made specifically for the Eisch Lab at the Children's Hospital of Philadelphia and University of Pennsylvania.
Language:Python0 0 00
DevelopmentalMilestonesBehavior
Stereolithography files for 3D printing modular behavioral apparatuses for testing the behavioral milestones of mouse development
0 1 01
FKiffer
Config files for my GitHub profile.
00
Landau-h
This script allows for the generation of sociomatrices, Landau's h, and DeVries' correction for missing samples for societies of variable size
Language:Jupyter Notebook0 0 00

FKiffer's Repositories

FKiffer/19AFemalesSurvival
Statistics for survival analyses of the NSRL19A Females project
Language:HTML0 1 01
FKiffer/19AMalesHazardRatios
Statistical analyses for mouse survival
Language:Jupyter Notebook0 0 00
FKiffer/19C
R notebooks for for statistical reporting of the NSRL19C project
Language:HTML0 1 00
FKiffer/AllenBrainAtlasCircularDendrogram-Mouse-CCFv3-
An exhaustive R-based circular dendrogram depicting the complete hierarchy of the Allen mouse brain atlas (CCFv3). This circular graph object can be transformed and included in analyses workflows for visualizing global or focused network information data of the global mouse brain.n
01
FKiffer/Deepethogram-Processing
Simple scripts to quickly process the output files from deepethogram with the most common behavioral measures
Language:Python00
FKiffer/DeepLabCut
Experimental implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
Language:Python0 0 00
FKiffer/deeplabcut-social-interaction
An application that cleans the pose estimation output from DeepLabCut and produces a CSV file containing information for the rodent social interaction test. Additionally, the application has a feature that allows for live video analysis of the behavioral test. This application was made specifically for the Eisch Lab at the Children's Hospital of Philadelphia and University of Pennsylvania.
Language:Python0 0 00
FKiffer/DevelopmentalMilestonesBehavior
Stereolithography files for 3D printing modular behavioral apparatuses for testing the behavioral milestones of mouse development
0 1 01
FKiffer/FKiffer
Config files for my GitHub profile.
00
FKiffer/Landau-h
This script allows for the generation of sociomatrices, Landau's h, and DeVries' correction for missing samples for societies of variable size
Language:Jupyter Notebook0 0 00
FKiffer/NSRL19AFemales
Statistics for the NSRL 19A Females project
Language:HTML1 01