Pinned Repositories
_CoCa-pytorch_
alphafold
Open source code for AlphaFold.
AutoDock-Vina
AutoDock Vina
composer
Supercharge Your Model Training
CSC2541_PPI
DeepSpeed
DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.
depmap_omics
What you need to process the Quarterly DepMap-Omics releases from Terra
DGraphDTA
a novel DTA predition method using graph neural network
DLKcat
Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic models (ecGEMs) reconstruction
ECE1512_2022W_ProjectRepo_FatemehPouryahya
Visual Interpretation of Convolutional Neural Networks
FatemehPouryahya's Repositories
FatemehPouryahya/_CoCa-pytorch_
FatemehPouryahya/alphafold
Open source code for AlphaFold.
FatemehPouryahya/AutoDock-Vina
AutoDock Vina
FatemehPouryahya/composer
Supercharge Your Model Training
FatemehPouryahya/DeepSpeed
DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.
FatemehPouryahya/depmap_omics
What you need to process the Quarterly DepMap-Omics releases from Terra
FatemehPouryahya/DGraphDTA
a novel DTA predition method using graph neural network
FatemehPouryahya/DLKcat
Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic models (ecGEMs) reconstruction
FatemehPouryahya/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
FatemehPouryahya/foldingdiff
Diffusion models of protein structure; trigonometry and attention are all you need!
FatemehPouryahya/foldseek
Foldseek enables fast and sensitive comparisons of large structure sets.
FatemehPouryahya/GFAffix
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
FatemehPouryahya/Human-GEM
The generic genome-scale metabolic model of Homo sapiens
FatemehPouryahya/IgFold
Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
FatemehPouryahya/latent-diffusion
High-Resolution Image Synthesis with Latent Diffusion Models
FatemehPouryahya/misato-dataset
FatemehPouryahya/MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
FatemehPouryahya/MutDTA
Improving the precision oncology pipeline by providing binding affinity purtubations predictions on a pirori identified cancer driver genes.
FatemehPouryahya/MVFA-AD
[CVPR2024] Adapting Visual-Language Models for Generalizable Anomaly Detection in Medical Images
FatemehPouryahya/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
FatemehPouryahya/parquet-format
Apache Parquet
FatemehPouryahya/pggb
the pangenome graph builder
FatemehPouryahya/ray
Ray is a unified framework for scaling AI and Python applications. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.
FatemehPouryahya/RDE-PPI
:mountain: Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)
FatemehPouryahya/RFdiffusion
Code for running RFdiffusion
FatemehPouryahya/scGPT
FatemehPouryahya/StableDiffusionReconstruction
Takagi and Nishimoto, CVPR 2023
FatemehPouryahya/Tangram
Spatial alignment of single cell transcriptomic data.
FatemehPouryahya/TaxDiff
The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"
FatemehPouryahya/UniKP