A go program which search the papers from ncbi. Currently only suport search pmc database.
git clone https://github.com/FayeZheng0/ask_pubmed.git
go build
./ask_pubmed httpd 5009
Provide two Get and Post method to query papers,both of them return the same data struct.
GET /api/search/:query
This API will return search result. query is required. will return 3 papers by default.
POST /api/search
This API will return search result. The payload should be a JSON object containing the following fields:
{
// the query content, required
"query": "the request query content",
// the threshold of search similarity score
"threshold": 0.3,
// expected return search amount
"amount": 5
}
{
"ts": 1686107732760,
"data": {
"resq": {
// the request query
"query": "query",
// the papers info
"papers": [
{
// the similarity score between paper abstract and request reery
"search_score": 0.47601396,
"article_title": "Carcinogenesis: Failure of resolution of inflammation?",
"abstract": "paper abstract",
"keywords": [
"Eicosanoid",
"Carcinogen",
],
"doi": "10.1016/j.pharmthera.2020.107670",
"pmc_id": "7470770",
"pm_id": "32891711",
"author": "Panigrahy Dipak",
"url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470770/",
"pub_year": "2020"
},
{
"search_score": 0.4270485,
"article_title": "Mechanisms of obesity- and diabetes mellitus-related pancreatic carcinogenesis: a comprehensive and systematic review",
"abstract": "paper abstract",
"keywords": [
"Cancer microenvironment",
"Gastrointestinal cancer",
"Endocrine system and metabolic diseases"
],
"doi": "10.1038/s41392-023-01376-w",
"pmc_id": "10039087",
"pm_id": "36964133",
"author": "Zhao Yupei",
"url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10039087/",
"pub_year": "2023"
}
],
// keywords which AI return as search keywords of NCBI
"keywords": [
"(\"bacteria\" and \"cancer\") and (\"pathogenesis\" or \"carcinogenesis\" or \"tumorigenesis\" or \"inflammation\")"
],
"threshold": 0.3,
"paper_count": 3
}
}
}