Pinned Repositories
100-Days-Of-ML-Code
100 Days of ML Coding
100-Days-Of-ML-Code-1
100-Days-Of-ML-Code中文版
10xPilot_snRNAseq-human
10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC
1806
18.06 course at MIT
2019-ncov-japan
🦠 Interactive dashboard for real-time recording of COVID-19 outbreak in Japan
2020_Wilk_COVID
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
3Dmol.js
WebGL accelerated JavaScript molecular graphics library
5xFAD-sNucSeq
Code used for the analysis of single nucleus RNA-seq (sNuc-Seq) data from WT and 5xFAD Alzheimer's disease mouse model, and an algorithmic approach to track changes in cell states across time.
5years
ubiquitous-guacamole
Feigeliudan01's Repositories
Feigeliudan01/adult-human-brain
Cytograph version used for adult human-brain analysis
Feigeliudan01/annotated_deep_learning_paper_implementations
🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
Feigeliudan01/BAlaS
Source code for the BUDE Alanine Scan web application.
Feigeliudan01/BEYOND_DLPFC
Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
Feigeliudan01/biccn_tilgner_scisorseq
Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner
Feigeliudan01/BiG-SCAPE
Similarity networks of biosynthetic gene clusters
Feigeliudan01/CellChatv2
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Feigeliudan01/Cheminformatics-Teaching-Material
Resources, Code, and Other things I use to teach Cheminformatics.
Feigeliudan01/clusterProfiler_protocol
omics data analysis using clusterProfiler ;)
Feigeliudan01/deepchem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
Feigeliudan01/DKD_RA
Code for research article of RA treatment on DKD
Feigeliudan01/drc
Fitting dose-response models in R
Feigeliudan01/DT-AI
这是DT-AI的学习路线开源版本，欢迎大家享用！对新手友好
Feigeliudan01/GeminiMol
Incorporation of conformational space profile into molecular representation learning, and its application to drug discovery, including virtual screening, target identification, and QSAR.
Feigeliudan01/gmx_MMPBSA
gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.
Feigeliudan01/gromacs
Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/gromacs/gromacs for code review and issue tracking.
Feigeliudan01/Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
Feigeliudan01/omicverse-reproducibility
Reproducibility of results/figures from omicverse paper
Feigeliudan01/PepNet
The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra
Feigeliudan01/PeptideModels
Code for peptide ligand design with machine learning models.
Feigeliudan01/PMDM
Feigeliudan01/practical_cheminformatics_tutorials
Practical Cheminformatics Tutorials
Feigeliudan01/ProtGenerics
S4 generic functions for Bioconductor mass spectrometry infrastructure
Feigeliudan01/SeuratExtend
Feigeliudan01/ShinyCell
Shiny Interactive Web Apps for Single-Cell Data
Feigeliudan01/single_cell_tutorial
单细胞分析的中文pipeline
Feigeliudan01/Spinal-cord-scRNAseq
Supplementary code for the analyses presented in the manuscript: Microglia coordinate intracellular interactions during spinal cord repair in mice
Feigeliudan01/teachopencadd
TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
Feigeliudan01/TranSiGen
Feigeliudan01/ursa
One-Stop Solution to Single-Cell Multi-Omics Analysis