FerrenaAlexander

Bioinformatician, NYU Langone Health. PhD, Albert Einstein College of Medicine, 2024.

NYU Langone HealthNYC

Pinned Repositories

OS_TKODKObulk
Language:R1 2 00
scDAPP
A end-to-end scRNA-seq analysis pipeline for cross-group comparison
Language:R17 2 00
OmicsWorkshop
Language:HTML6 2 00
1-Shell-Basics
00
10-python-analysis2
Language:Jupyter Notebook00
11-plotting
Language:Jupyter Notebook0 0 00
12-parallel-genomics
Language:Jupyter Notebook0 0 00
2-git-and-more
Language:Jupyter Notebook0 0 00
FerrenaAlexander.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Language:JavaScript01
FerrenaBulkRNAseq
Pipeline for analysis of bulkRNAseq data
Language:R1 1 00

FerrenaAlexander's Repositories

FerrenaAlexander/FerrenaBulkRNAseq
Pipeline for analysis of bulkRNAseq data
Language:R1 1 00
FerrenaAlexander/10-python-analysis2
Language:Jupyter Notebook00
FerrenaAlexander/11-plotting
Language:Jupyter Notebook0 0 00
FerrenaAlexander/12-parallel-genomics
Language:Jupyter Notebook0 0 00
FerrenaAlexander/FerrenaAlexander.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Language:JavaScript01
FerrenaAlexander/2021may-DKOvsTKOvsSkp2inhib-bulk
1 0
FerrenaAlexander/3-Python-basics
Language:Jupyter Notebook
FerrenaAlexander/4-Python-advanced
Language:Jupyter Notebook0 0
FerrenaAlexander/5-Packaging
Now we'll learn to write a Python package
Language:Jupyter Notebook
FerrenaAlexander/6-scientific-python
Scientific tools for Python: Numpy, Scipy, Pandas
Language:Jupyter Notebook1 0
FerrenaAlexander/7-remote-subprocess
SSH connections to HPC; remote jupyter; subprocess module
Language:Jupyter Notebook0 0
FerrenaAlexander/8-python-web
Python tools for scraping data from the web
Language:Jupyter Notebook0 0
FerrenaAlexander/9-python-analysis1
machine learning
Language:Jupyter Notebook
FerrenaAlexander/clusterquality
Language:R0 0
FerrenaAlexander/ConcatFastqLanes
concat lanes of fastq.gz or fq.gz files
Language:Shell
FerrenaAlexander/FerrenaAlexander
1 0
FerrenaAlexander/FerrenaSCRNAseq
Package for QC, processing and analysis of scRNAseq data
Language:R1 0
FerrenaAlexander/helloworld
assignment 5
Language:Python
FerrenaAlexander/Matrix.utils
Deprecated dependency of RISC and other packages
Language:R0 0
FerrenaAlexander/OS_TKODKObulk
Language:R
FerrenaAlexander/PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
Language:Jupyter Notebook0 0
FerrenaAlexander/records
download from GBIF
Language:Python
FerrenaAlexander/scDAPP_example_data
Language:HTML1 0
FerrenaAlexander/seqlib
code for generating simulated sequences and performing basic genomic-oriented biostats
Language:Python0 0
FerrenaAlexander/shanghai_scRNAseq
Language:R
FerrenaAlexander/sliceanddice
PDSB project; single cell rna-seq coexpression tool
Language:Jupyter Notebook
FerrenaAlexander/tamlabscpipeline
A basic package for scRNAseq data analysis
Language:R1 0
FerrenaAlexander/target
Language:R
FerrenaAlexander/transcriptomesaturation
Language:Jupyter Notebook
FerrenaAlexander/youtubetutorialpkg
Language:R1 0