FowlerLab/Enrich2

Could not load matplot lib

VikasDT opened this issue · 1 comments

I am getting the following error for all the plots. Though the software could generate the pdf files.

2020-10-22 16:16:21,140 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage1" as iconphoto: not a photo image
2020-10-22 16:16:21,894 [enrich2.experiment.<class 'enrich2.experiment.Experiment'>] Creating sequence-function map (E3, nucleotide)
2020-10-22 16:16:21,962 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage10" as iconphoto: not a photo image
2020-10-22 16:16:22,342 [enrich2.selection.Selection - Rep1] Creating plots
2020-10-22 16:16:22,343 [enrich2.selection.Selection - Rep1] Creating time point count plots (barcodes)
2020-10-22 16:16:22,410 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage19" as iconphoto: not a photo image
2020-10-22 16:16:22,549 [enrich2.selection.Selection - Rep1] Creating time point count plots (variants)
2020-10-22 16:16:22,617 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage28" as iconphoto: not a photo image
2020-10-22 16:16:22,756 [enrich2.selection.Selection - Rep1] Creating time point count plots (synonymous)
2020-10-22 16:16:22,820 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage37" as iconphoto: not a photo image
2020-10-22 16:16:23,060 [enrich2.selection.Selection - Rep1] Creating wild type fit plot
2020-10-22 16:16:23,137 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage46" as iconphoto: not a photo image
2020-10-22 16:16:23,383 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage55" as iconphoto: not a photo image
2020-10-22 16:16:23,663 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage64" as iconphoto: not a photo image
2020-10-22 16:16:23,942 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage73" as iconphoto: not a photo image
2020-10-22 16:16:24,188 [enrich2.selection.Selection - Rep1] Creating representative fit plots (barcodes)
2020-10-22 16:16:24,417 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage82" as iconphoto: not a photo image
2020-10-22 16:16:27,129 [enrich2.selection.Selection - Rep1] Creating representative fit plots (variants)
2020-10-22 16:16:27,429 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage91" as iconphoto: not a photo image
2020-10-22 16:16:30,150 [enrich2.selection.Selection - Rep1] Creating representative fit plots (synonymous)
2020-10-22 16:16:30,379 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage100" as iconphoto: not a photo image
2020-10-22 16:16:32,970 [enrich2.selection.Selection - Rep1] Creating volcano plot (barcodes)
2020-10-22 16:16:33,101 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage109" as iconphoto: not a photo image
2020-10-22 16:16:33,525 [enrich2.selection.Selection - Rep1] Creating volcano plot (variants)
2020-10-22 16:16:33,643 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage118" as iconphoto: not a photo image
2020-10-22 16:16:33,981 [enrich2.selection.Selection - Rep1] Creating volcano plot (synonymous)
2020-10-22 16:16:34,098 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage127" as iconphoto: not a photo image
2020-10-22 16:16:34,523 [enrich2.selection.Selection - Rep1] Creating diversity map (amino acid)
2020-10-22 16:16:34,627 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage136" as iconphoto: not a photo image
2020-10-22 16:16:35,214 [enrich2.selection.Selection - Rep1] Creating diversity map (amino acid)
2020-10-22 16:16:35,258 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage145" as iconphoto: not a photo image
2020-10-22 16:16:35,677 [enrich2.selection.Selection - Rep1] Creating diversity map (amino acid)
2020-10-22 16:16:35,722 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage154" as iconphoto: not a photo image
2020-10-22 16:16:36,160 [enrich2.selection.Selection - Rep1] Creating diversity map (nucleotide)
2020-10-22 16:16:36,277 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage163" as iconphoto: not a photo image
2020-10-22 16:16:36,602 [enrich2.selection.Selection - Rep1] Creating diversity map (nucleotide)
2020-10-22 16:16:36,648 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage172" as iconphoto: not a photo image
2020-10-22 16:16:36,974 [enrich2.selection.Selection - Rep1] Creating diversity map (nucleotide)
2020-10-22 16:16:37,024 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage181" as iconphoto: not a photo image
2020-10-22 16:16:37,481 [enrich2.selection.Selection - Rep1] Creating sequence-function map (amino acid)
2020-10-22 16:16:37,632 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage190" as iconphoto: not a photo image
2020-10-22 16:16:38,168 [enrich2.selection.Selection - Rep1] Creating sequence-function map (nucleotide)
2020-10-22 16:16:38,298 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage199" as iconphoto: not a photo image
2020-10-22 16:16:38,770 [enrich2.barcodevariant.BcvSeqLib - E3 input] Creating plots
2020-10-22 16:16:38,825 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage208" as iconphoto: not a photo image
2020-10-22 16:16:39,823 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage217" as iconphoto: not a photo image
2020-10-22 16:16:40,096 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage226" as iconphoto: not a photo image
2020-10-22 16:16:40,551 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage235" as iconphoto: not a photo image
2020-10-22 16:16:40,811 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage244" as iconphoto: not a photo image
2020-10-22 16:16:41,265 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage253" as iconphoto: not a photo image
2020-10-22 16:16:41,561 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage262" as iconphoto: not a photo image
2020-10-22 16:16:41,886 [enrich2.barcodevariant.BcvSeqLib - Rep1 Rd2] Creating plots
2020-10-22 16:16:41,936 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage271" as iconphoto: not a photo image
2020-10-22 16:16:42,448 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage280" as iconphoto: not a photo image
2020-10-22 16:16:42,756 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage289" as iconphoto: not a photo image
2020-10-22 16:16:43,212 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage298" as iconphoto: not a photo image
2020-10-22 16:16:43,463 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage307" as iconphoto: not a photo image
2020-10-22 16:16:43,877 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage316" as iconphoto: not a photo image
2020-10-22 16:16:44,154 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage325" as iconphoto: not a photo image
2020-10-22 16:16:44,389 [enrich2.barcodevariant.BcvSeqLib - Rep1 Rd5] Creating plots
2020-10-22 16:16:44,431 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage334" as iconphoto: not a photo image
2020-10-22 16:16:45,025 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage343" as iconphoto: not a photo image
2020-10-22 16:16:45,329 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage352" as iconphoto: not a photo image
2020-10-22 16:16:45,784 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage361" as iconphoto: not a photo image
2020-10-22 16:16:46,026 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage370" as iconphoto: not a photo image
2020-10-22 16:16:46,433 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage379" as iconphoto: not a photo image
2020-10-22 16:16:46,703 [matplotlib.backends._backend_tk] Could not load matplotlib icon: can't use "pyimage388" as iconphoto: not a photo image
2020-10-22 16:16:46,937 [enrich2.experiment.<class 'enrich2.experiment.Experiment'>] Generating tab-separated output files

Any suggestion?

This looks like a warning/error message that depends on your matplotlib installation but is safe to ignore. If the PDF files were generated successfully, I don't think there is anything to fix but thank you for bringing it up.