FrancescaDr
PhD in Computational Biology | MSc Computer Science & BSc Artificial Intelligence
Helmholtz Munich | TU Munich
FrancescaDr's Stars
theislab/graphcompass
GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems
scverse/pertpy
Perturbation Analysis in the scverse ecosystem.
saeyslab/napari-sparrow
theislab/geome
scverse/scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data
facebookresearch/CPA
The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of drugs, learns interpretable embeddings, estimates dose-response curves, and provides uncertainty estimates.