/EcoNets

Matlab Software for Simulating Ecological Networks

Primary LanguageMATLABGNU General Public License v3.0GPL-3.0

EcoNets

This repository contains Matlab software for simulating ecological networks and foodweb dynamics, and for inferring Bayesian networks from such data. This software was used to simulate the data and perform some of the analysis for the paper by [Faisal, Dondelinger et al. (2010)]((http://eprints.gla.ac.uk/69298/1/69298.pdf). Original ecological network simulation code by Jonathan Yearsley, with modifications by Frank Dondelinger. Original Bayesian network code by Marco Grzegorczyk, with modifications by Frank Dondelinger.

References

Faisal, A., Dondelinger, F., Husmeier, D., & Beale, C. M. (2010). Inferring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics.