Pinned Repositories
centertbi-mri
Center-TBI MRI demographics assessment, data quality assessment and unsupervised analysis (Work Package 15 task 3)
COFFEE_BREAK_FDGPET
Coffee break script to optimize FDG-PET analyses in disorders of consciousness
csg_dicoms_anonymizer
Robust and easy to use generic dicoms anonymizer with demographics csv spreadsheet anonymization by hashed ids
csg_eeg_toolbox
EEG toolbox based on FASST and SPM12, by Dorothée Coppieters
csg_mri_pipelines
MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness
easytextract
Easy to use text extractor, from PDF, DOC, DOCX and other documents, including if necessary using OCR (via Tesseract).
mri_protocol
A clinical and research 3T MRI protocol under 30 minutes, presented at CME2019
neuro-python-plotting
Various scripts to plot neuroimaging results using python
neuro_slides
Slides and documentation resources I and my colleagues presented at various events.
structurefunction
Repository for DTI / PET / fMRI / T1 mapping
GIGA-Consciousness's Repositories
GIGA-Consciousness/structurefunction
Repository for DTI / PET / fMRI / T1 mapping
GIGA-Consciousness/COFFEE_BREAK_FDGPET
Coffee break script to optimize FDG-PET analyses in disorders of consciousness
GIGA-Consciousness/centertbi-mri
Center-TBI MRI demographics assessment, data quality assessment and unsupervised analysis (Work Package 15 task 3)
GIGA-Consciousness/csg_datafusion
Jupyter notebooks to do data fusion on patients demographics databases
GIGA-Consciousness/csg_dicoms_anonymizer
Robust and easy to use generic dicoms anonymizer with demographics csv spreadsheet anonymization by hashed ids
GIGA-Consciousness/csg_eeg_toolbox
EEG toolbox based on FASST and SPM12, by Dorothée Coppieters
GIGA-Consciousness/csg_mri_pipelines
MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness
GIGA-Consciousness/easytextract
Easy to use text extractor, from PDF, DOC, DOCX and other documents, including if necessary using OCR (via Tesseract).
GIGA-Consciousness/mri_protocol
A clinical and research 3T MRI protocol under 30 minutes, presented at CME2019
GIGA-Consciousness/neuro-python-plotting
Various scripts to plot neuroimaging results using python
GIGA-Consciousness/neuro_slides
Slides and documentation resources I and my colleagues presented at various events.
GIGA-Consciousness/PET_Metabolic_Index
GIGA-Consciousness/CSG_DWI_Patients_Reports
This is the repository containing the codes necessary for DWI preprocessing and tractography needed for patients reports.
GIGA-Consciousness/fdict
Easy out-of-core computing with nested data structures in Python as a drop-in replacement of dict
GIGA-Consciousness/Integration-Segregation-SW-Efficiency
The code compute absolute and normalized graph theory measures, which includes Brain Network Integration, Segregation, Small worldness, global and local efficiency, degree plath length, modularity, comunity index etc... The program uses BCT functions, so to run this program you should have BCT toolbox in your MATLAB path BCT toolbox can be download from here: https://sites.google.com/site/bctnet/
GIGA-Consciousness/resting_EEG_Mohawk_Connectivity