Pinned Repositories
AutoMitoC
Automatic Mitochondrial DNA Copy Number (mtDNA-CN) Pipeline to infer mtDNA-CN from SNP array intensities
GraBLD
an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.
lmutils
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
lmutils.r
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
MonsterLM
A method to estimate the proportion of variance explained by heritability and gene-by-environment interactions, in a fast, accurate, efficient, and unbiased manner on biobank-scale datasets (N>300,000).
phewmr-filter-snps
plots.r
Generate beautiful forest plots with ease
RARity
A method to estimate rare variant heritability. Its versatility lies in the ability to estimate both gene-level and exome-wide heritability, in a fast, accurate, and unbiased manner.
RV-EXCALIBER
A methodological framework to conduct a calibrated gene-based rare variant association test by leveraging the genome aggregation database (gnomAD) as an external control dataset
Genetic and Molecular Epidemiology Laboratory 's Repositories
GMELab/GraBLD
an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.
GMELab/RV-EXCALIBER
A methodological framework to conduct a calibrated gene-based rare variant association test by leveraging the genome aggregation database (gnomAD) as an external control dataset
GMELab/AutoMitoC
Automatic Mitochondrial DNA Copy Number (mtDNA-CN) Pipeline to infer mtDNA-CN from SNP array intensities
GMELab/RARity
A method to estimate rare variant heritability. Its versatility lies in the ability to estimate both gene-level and exome-wide heritability, in a fast, accurate, and unbiased manner.
GMELab/MonsterLM
A method to estimate the proportion of variance explained by heritability and gene-by-environment interactions, in a fast, accurate, efficient, and unbiased manner on biobank-scale datasets (N>300,000).
GMELab/lmutils
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
GMELab/lmutils.r
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
GMELab/phewmr-filter-snps
GMELab/plots.r
Generate beautiful forest plots with ease