Gabriel-A-Barrett

configs

Config files used to define parameters specific to compute environments at different Institutions

dDocent

a bash pipeline for RAD sequencing

gabriel-a-barrett.github.io

Gabriel_Lab_Notebook

Lab Notebook containing the molecular methods and metadata

github-slideshow

A robot powered training repository :robot:

Grayling_gwas_nf

Population Genomics

microcosm-api

java API for managing grow conditions through raspberry pi

nf-core-testpipeline

A pipeline for testing

nf-vg-pipeline

nf_pipeline_template

barebones template for a WSL2 nextflow pipeline.

Gabriel-A-Barrett/nf-vg-pipeline

Gabriel-A-Barrett/configs

Config files used to define parameters specific to compute environments at different Institutions

Gabriel-A-Barrett/dDocent

a bash pipeline for RAD sequencing

Gabriel-A-Barrett/gabriel-a-barrett.github.io

Gabriel-A-Barrett/Gabriel_Lab_Notebook

Lab Notebook containing the molecular methods and metadata

Gabriel-A-Barrett/github-slideshow

A robot powered training repository :robot:

Gabriel-A-Barrett/Grayling_gwas_nf

Population Genomics

Gabriel-A-Barrett/microcosm-api

java API for managing grow conditions through raspberry pi

Gabriel-A-Barrett/nf-core-testpipeline

A pipeline for testing

Gabriel-A-Barrett/nf_pipeline_template

barebones template for a WSL2 nextflow pipeline.

Gabriel-A-Barrett/nf_vcffilter

Gabriel-A-Barrett/radseq

Gabriel-A-Barrett/reveal.js

The HTML Presentation Framework

Gabriel-A-Barrett/rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Gabriel-A-Barrett/sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Gabriel-A-Barrett/test-datasets

Test data to be used for automated testing with the nf-core pipelines

Gabriel-A-Barrett/tgdrLib