Hisat mapping
aureliendejode opened this issue · 0 comments
aureliendejode commented
Hello,
I have followed the BGA2023 video to run BRAKER3 and have a question about the Hisat2 mapping.
I am running that step independently and I have noticed that in the video the --dta option is not mentioned but in the github page it says you must use --dta option when mapping with hisat2.
Can you clarify this ?
Thanks for your help
Best
Aurélien