Galithil
I spend most of my life pressing buttons to make a pattern of lights change however I want. Today, the pattern of lights is all wrong.
InivataCambridge, UK
Pinned Repositories
advent_of_code_2018
https://adventofcode.com/2018
bcbio-nextgen
Best-practice pipelines for fully automated high throughput sequencing analysis
bisect-me
Git bisect exercise.
charon
Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.
Gaffophone
Reddit bot that makes noise.
genologics
Python interface to the GenoLogics LIMS server via its REST API.
genologics_sql
Python interface for the Genologics Postgres database.
LIMS2DB
MultiQC_Clarity
MultiQC plugin interacting with the Illumina Genologics Clarity LIMS
status
Galithil's Repositories
Galithil/genologics_sql
Python interface for the Genologics Postgres database.
Galithil/Gaffophone
Reddit bot that makes noise.
Galithil/status
Galithil/advent_of_code_2018
https://adventofcode.com/2018
Galithil/charon
Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.
Galithil/genologics
Python interface to the GenoLogics LIMS server via its REST API.
Galithil/LIMS2DB
Galithil/MultiQC_Clarity
MultiQC plugin interacting with the Illumina Genologics Clarity LIMS
Galithil/covid_2021
Galithil/django_2FA_example
Galithil/django_graph-webapp
Galithil/flowcell_parser
Collection of python scripts to parse Illumina Xten output
Galithil/gali_uttt_bot
Galithil/Galithil.github.io
Galithil/git-rebase-squash-exercise
Git rebase and commit squashing exercise.
Galithil/github-workflow-exercise
Exercise to practice collaborative GitHub workflow.
Galithil/irma-provision
Ansible playbooks for provisioning NGI pipeline and related sw
Galithil/ktane_python
Galithil/lims_dashboard
Galithil/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Galithil/NGI-RNAseq
Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
Galithil/NGI_dashboards
SciLifeLab NGI Dashboard Code
Galithil/ngi_pipeline
Code driving the production pipeline at SciLifeLab (not yet in production)
Galithil/scilifelab
Misc code snippets for Science For Life Laboratory
Galithil/scilifelab_epps
A collection of Genologics Clarity LIMS EPPs used at Scilifelab.
Galithil/standalone_scripts
Repository to store standalone scripts that do not belong to any bigger package or repository
Galithil/statusdb
Python wrappers and methods to work with CouchDB's instance at NGI Stockholm
Galithil/TACA
Tool for the Automation of Cleanup and Analyses
Galithil/tflearn
Deep learning library featuring a higher-level API for TensorFlow.
Galithil/travis-testing