GavinWinner

Pinned Repositories

100-Days-Of-ML-Code
100 Days of ML Coding
0 1 00
agilent
Microarray analysis of agilent data
Language:R0 1 00
bamdst
a lightweight bam file depth statistical tool
Language:C0 1 00
bedtools2
A powerful toolset for genome arithmetic.
Language:C++00
bioawk
BWK awk modified for biological data
Language:C0 1 00
blat
BLAST-Like Alignment Tool
Language:C0 1 00
bubblewrap
Unprivileged sandboxing tool
Language:C0 1 00
bypy
Python client for Baidu Yun (Personal Cloud Storage) 百度云/百度网盘Python客户端
Language:Python0 1 00
canonical_transcript
经典转录本
Language:Python0 1 00
diamond
Accelerated BLAST compatible local sequence aligner.
Language:C++1 1 00

GavinWinner's Repositories

GavinWinner/diamond
Accelerated BLAST compatible local sequence aligner.
Language:C++1 1 00
GavinWinner/100-Days-Of-ML-Code
100 Days of ML Coding
0 1 00
GavinWinner/bamdst
a lightweight bam file depth statistical tool
Language:C0 1 00
GavinWinner/blat
BLAST-Like Alignment Tool
Language:C0 1 00
GavinWinner/bubblewrap
Unprivileged sandboxing tool
Language:C0 1 00
GavinWinner/bypy
Python client for Baidu Yun (Personal Cloud Storage) 百度云/百度网盘Python客户端
Language:Python0 1 00
GavinWinner/canonical_transcript
经典转录本
Language:Python0 1 00
GavinWinner/cdhit
Automatically exported from code.google.com/p/cdhit
Language:Perl
GavinWinner/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Language:Python
GavinWinner/docbook
docbook
Language:XSLT
GavinWinner/Exomiser
A Tool to Annotate and Prioritize Exome Variants
Language:Java1 0
GavinWinner/gtrellis
Genomic plot in trellis layout
Language:R
GavinWinner/gtz
A high performance and compression ratio compressor, powered by GTXLab of Genetalks.
GavinWinner/hap.py
Haplotype VCF comparison tools
GavinWinner/infernal
RNA secondary structure/sequence profiles for homology search and alignment
Language:C1 0
GavinWinner/InterVar
A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline
Language:Python1 0
GavinWinner/manta
Structural variant and indel caller for mapped sequencing data
Language:C++1 0
GavinWinner/Panda-Learning
学习强国xuexiqiangguo--熊猫学习Panda-Learning是一个辅助学习学习强国的程序,帮助挤不出时间，却仍然需要学习的积极分子，学习强国(xuexiqiangguo)
Language:HTML1 0
GavinWinner/PharmCAT
The Pharmacogenomic Clinical Annotation Tool
Language:Java1 0
GavinWinner/PhyloCSF
Phylogenetic analysis of multi-species genome sequence alignments to identify conserved protein-coding regions
Language:OCaml1 0
GavinWinner/PrimateAI
deep residual neural network for classifying the pathogenicity of missense mutations.
Language:Python1 0
GavinWinner/python-docx-template
Use a docx as a jinja2 template
Language:Python1 0
GavinWinner/pywin32
Python for Windows (pywin32) Extensions
Language:C++1 0
GavinWinner/sambamba
Tools for working with SAM/BAM/CRAM data
Language:D1 0
GavinWinner/snakemake-cnvseq
Snakemake workflow for processing CNV-seq data.
Language:Python1 0
GavinWinner/STAR
RNA-seq aligner
Language:C1 0
GavinWinner/STAR-Fusion
STAR-Fusion codebase
Language:Perl1 0
GavinWinner/strelka
Strelka2 germline and somatic small variant caller
GavinWinner/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
Language:Perl1 0
GavinWinner/wisecondor
WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data.
Language:Python1 0