Pinned Repositories
dask-image
Distributed image processing
autolamella
dask-image-talk-2020
PyConlineAU 2020 talk - dask-image library
distributed-skeleton-analysis
Distributed skeleton analysis with Dask
napari-big-data-training
napari-meshio
I/O for mesh files.
pyconau-2019-talk
PyConAu 2019 lightning talk - logging with python
slice-interpolation
Slice interpolation for label images
microscopium
Unsupervised clustering of high content screen samples
GenevieveBuckley's Repositories
GenevieveBuckley/dask-image-talk-2020
PyConlineAU 2020 talk - dask-image library
GenevieveBuckley/napari
napari: a fast, interactive, multi-dimensional image viewer for python
GenevieveBuckley/cookiecutter-napari-plugin
Cookiecutter for napari plugins
GenevieveBuckley/dask-image
Distributed image processing
GenevieveBuckley/magicgui
build GUIs from python functions, using magic.
GenevieveBuckley/tifffile
Read and write TIFF(r) files. Forked from https://pypi.org/project/tifffile
GenevieveBuckley/zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
GenevieveBuckley/affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
GenevieveBuckley/Checkers
Checkers, an image-splitting tool to enable Noise2Noise denoising methods in cryo-STET
GenevieveBuckley/conda-forge.github.io
The conda-forge website.
GenevieveBuckley/demo_template
A demo pytest-copie template repository
GenevieveBuckley/GoldDigger
GoldDigger, an extensive fiducial detection and tracking tool for cryo-STET datasets
GenevieveBuckley/imageio-ffmpeg
FFMPEG wrapper for Python
GenevieveBuckley/Lumache
A sphinx documentation setup tutorial: https://www.sphinx-doc.org/en/master/tutorial/getting-started.html
GenevieveBuckley/membrain-seg
membrane segmentation in 3D for cryo-ET
GenevieveBuckley/meshio
:spider_web: input/output for many mesh formats
GenevieveBuckley/micro-sam
Segment Anything for Microscopy
GenevieveBuckley/mkdocs-gallery
Same features as sphinx-gallery (https://sphinx-gallery.github.io/) but on mkdocs (https://www.mkdocs.org/) (no sphinx dependency !).
GenevieveBuckley/MONAI
AI Toolkit for Healthcare Imaging
GenevieveBuckley/napari-animation
A napari plugin for making animations
GenevieveBuckley/napari-docs
Documentation for napari (other than API docs)
GenevieveBuckley/napari-graph
Efficient graph data structures and algorithms for fast slicing, visualization, and editing
GenevieveBuckley/napari-plugin-template
A template repo used to make new napari plugins
GenevieveBuckley/napari-threedee
A 3D interactivity toolbox for napari
GenevieveBuckley/napari-tiff
A napari reader plugin for tiff images.
GenevieveBuckley/napari-xyzfile
Napari plugin for point data in .xyz file format
GenevieveBuckley/new-mkdocs-project
A test mkdocs setup
GenevieveBuckley/pytest-copie
The pytest plugin for your copier templates 📒
GenevieveBuckley/Pyto
Image processing of biological cryo-electron tomograms
GenevieveBuckley/test-mkdocs-links
Testing for issue https://github.com/pyapp-kit/magicgui/issues/584